Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Dickeya dianthicola ME23

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 11/141 (7%)

Query: 41  EIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLRSVSRRDARHDVLDDDAQ 100
           ++ D+VQ+  +  + A  +++ +     W+  IA     ++L +  RR    DV  +DA+
Sbjct: 45  DVPDVVQESFIKAYRALESFRGESAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAE 104

Query: 101 -------LFAVSEVESAEASRDLTKL----LKQLPERQRLPIVHVKLEGLSVEETAQLTG 149
                  L  +S  E+   S +L ++    ++ LPE  RL I   +L+GLS EE A +  
Sbjct: 105 NYENASALKEISNPENLMLSEELRRIVFHTIESLPEDLRLAITLRELDGLSYEEIAAIMD 164

Query: 150 LSSSAVKVGIHRGLKALSRLI 170
                V+  I R  +A+   +
Sbjct: 165 CPVGTVRSRIFRAREAIDNKV 185