Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 198 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 44  DMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLRSVSRRDARHDVLDDDAQLFA 103
           D+VQD  L + N R    P +P+   +   A+  + +++R   R+  +H  + +++  F+
Sbjct: 52  DVVQDTFLKLWNYRAHIDPSKPIKPLIVTFAKRIILNNIRDEKRKILKHLEIFENSNSFS 111

Query: 104 VSEVESA---EASRDLTKLLKQLPERQRLPIVHVKLEGLSVEETAQLTGLSSSAVKVGIH 160
               E     E  +     +  LPER+R   +   ++G S EETA+  GLS + VK    
Sbjct: 112 NKTEEQVIYNETHQVYQAAVMALPERRREVFLLKSVQGKSNEETAEELGLSINTVKSQYT 171

Query: 161 RGLKALSRLI 170
           + L+A+   +
Sbjct: 172 KALQAIREFV 181