Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 199 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 48.5 bits (114), Expect = 7e-11
 Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 8/158 (5%)

Query: 16  YQDFLGTLALHVRAFLRSRLSRRPAEIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIAR 75
           +Q+F   L  + +  L+S+     ++ ED+V+ + + +   +  +  +  L +++    +
Sbjct: 25  FQEFYPGLCFYAQKILQSK-----SDAEDVVESLFVKLWQKKMEFSSKDHLRSFLYKSTK 79

Query: 76  YKLADHLRSVSRRDARHDVLDDDAQLFAVSEVES---AEASRDLTKLLKQLPERQRLPIV 132
               D +++ + +  R+    D  + F  S V +   AE  R++ + ++ LP +    I 
Sbjct: 80  NACLDFIKTATHKAERNGHFLDSREDFTQSHVTNMIRAEVVREIHQAIESLPTQCSTVIR 139

Query: 133 HVKLEGLSVEETAQLTGLSSSAVKVGIHRGLKALSRLI 170
              +EGLSV E A+   LS   VK    RGL  L R I
Sbjct: 140 KSYIEGLSVSEIAEEMSLSVQTVKNHKLRGLAMLRRKI 177