Pairwise Alignments

Query, 178 a.a., putative RNA polymerase sigma factor from Pseudomonas putida KT2440

Subject, 199 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 45.4 bits (106), Expect = 6e-10
 Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 3/144 (2%)

Query: 30  FLRSRLSRRPAEIEDMVQDVLLAVHNARHTYQPQQPLTAWVQAIARYKLADHLRSVSRRD 89
           F   R+ +   + ED+V+++ + +   +  +  +  L +++    +    D +++ +R  
Sbjct: 34  FYAERILQSKTDAEDVVENLFVKLWQKKMEFSSRDHLRSFLYKSTKNACLDFIKTAARSA 93

Query: 90  ARHDVLDDDAQLFAVSEVES---AEASRDLTKLLKQLPERQRLPIVHVKLEGLSVEETAQ 146
            R+    D A+ +  S + +   AE  R++ + ++ LP +    I    +EGLS+ E AQ
Sbjct: 94  ERNSHFLDTAEDYTKSHLTNMIRAEVIREIHQAIESLPAQCGTVIRKSYIEGLSLPEIAQ 153

Query: 147 LTGLSSSAVKVGIHRGLKALSRLI 170
              LS   VK    RGL  L + I
Sbjct: 154 EMSLSVQTVKNHKLRGLAILRKKI 177