Pairwise Alignments

Query, 317 a.a., Ribosomal RNA large subunit methyltransferase F from Pseudomonas putida KT2440

Subject, 303 a.a., Predicted SAM-dependent methyltransferase from Enterobacter asburiae PDN3

 Score =  332 bits (851), Expect = 7e-96
 Identities = 161/308 (52%), Positives = 216/308 (70%), Gaps = 7/308 (2%)

Query: 1   MTPNKPTLHPRNRHQGRYDFPSLIKAHPDLARFTITNPHGKPSIDFANPEAVRVFNRALL 60
           MT  KP LHPRNRH+ RYD  +L  + P L  + +  P G+PS++FA+P+AV++ N+ALL
Sbjct: 1   MTAQKPGLHPRNRHRSRYDMNALCLSCPPLQDYLVQTPAGEPSVNFADPQAVKMLNKALL 60

Query: 61  KAQYGIQHWDIPADYLCPPIPGRADYIHVAADLLADDNAGDVPRGAQVRALDIGVGANCI 120
              YG+ HWDIP  +LCPP+PGRADY+H  ADLLA+ N G VP+ A +  LDIG GAN I
Sbjct: 61  AHFYGVAHWDIPEGFLCPPVPGRADYVHHLADLLAEGNEGVVPQQATI--LDIGTGANLI 118

Query: 121 YPLLGYSDYRWRFLGSDIDPVALASAKAIVQAN-GLGKAITLRQQANRAHILSGLLQEGE 179
           YPL+G  +Y+WRF GS+I   A ASA+AI+ AN GL +AI LR+Q + A I +G++ + E
Sbjct: 119 YPLIGAHEYQWRFTGSEIGDEAFASAQAIISANPGLSRAIRLRRQKDAASIFNGIIHKNE 178

Query: 180 RFDLTLCNPPFHASRDEATRGSQRKWKNLGKQDPKRKLPVLNFGGQNNELWCEGGEIRFV 239
            +D T+CNPPFH S   A  GS+RK +NLG+ +       LNFGGQ  ELWCEGGE+ F+
Sbjct: 179 SYDATMCNPPFHDSAASARAGSERKRRNLGQAED----AALNFGGQQQELWCEGGEVAFI 234

Query: 240 TQLIGESVQYAERVLWFTSLVSKASNLPGIEAALKKSGAKAVRIIEMGQGQKQSRMVAWS 299
            ++I ES Q+  +V WFT+LVS+  NLP +  AL ++GA  V   EM QGQKQSR +AW+
Sbjct: 235 LRMIAESKQFGRQVKWFTTLVSRGDNLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWT 294

Query: 300 FLDDAARQ 307
           F+D+  R+
Sbjct: 295 FMDNHKRR 302