Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 234 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  136 bits (343), Expect = 3e-37
 Identities = 80/234 (34%), Positives = 124/234 (52%), Gaps = 6/234 (2%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L+  +L   Y    ++ DV L I +G++V LLG NGAGK+T F  IVGLV   +G V+ D
Sbjct: 3   LQVSNLNSHYGPAHILYDVGLEIGAGEVVALLGRNGAGKSTTFRSIVGLVPQREGTVMFD 62

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELESLLQ 123
             DVS  P +   R G+GY+P++  IF  L+V +N     E  +   R G       +L 
Sbjct: 63  GSDVSRLPTYEIVRRGLGYVPEDRRIFSHLTVEEN----FEVGRQAPRPGVATWTPDMLY 118

Query: 124 EF--HISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIH 181
           +   ++  +R   G  +SGGE++ + I R L   P  +LLDEP  G+ P  V  +   I 
Sbjct: 119 KLFPNLGEMRKRPGGQMSGGEQQMLTIGRTLMGNPSLVLLDEPSEGLAPKIVEQMADAIL 178

Query: 182 HLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYL 235
            +K +G+ V+I++ N+     I + AYI+  GR+   G    + AN  +++ YL
Sbjct: 179 AMKGEGLSVVISEQNLHFAKLISDRAYIIEKGRIRFSGTIADLEANPEIRDAYL 232