Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 260 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  131 bits (330), Expect = 1e-35
 Identities = 78/241 (32%), Positives = 135/241 (56%), Gaps = 8/241 (3%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L+ + L KSY G   VR VS ++++GQ++ L+GPNGAGK+TCF M+ G +  + G V I+
Sbjct: 5   LEVKDLMKSYGGVHAVRGVSFTVEAGQMLALIGPNGAGKSTCFNMLNGQIPPDAGTVRIE 64

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNI-MAILETRKDLDR------DGRRK 116
             D+   P     R G+G   Q  + F  ++V +N+ +A++     + R         R+
Sbjct: 65  GKDIKGLPPRAVWRLGVGRTFQITATFASMTVRENVQVALISFHGLISRVFGFAGAACRE 124

Query: 117 ELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDI 176
           E ++LL    ++         L+ G+ +R+E+A ALA  P+ +L+DEP AG+ P    ++
Sbjct: 125 EADALLALVGLTTQAQRPCGELAYGDLKRLELAVALANQPRLLLMDEPTAGMAPRERVEL 184

Query: 177 KQIIHHL-KAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYL 235
            ++   + +AKGIGVL T+H++    +  +   ++N G+LIA G    +  +  V+ +YL
Sbjct: 185 MRLTAEIARAKGIGVLFTEHDMDVVFEHADEVMVLNRGQLIARGTPAEVRRDPQVRAIYL 244

Query: 236 G 236
           G
Sbjct: 245 G 245