Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 584 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 7e-39
 Identities = 82/245 (33%), Positives = 128/245 (52%), Gaps = 12/245 (4%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L  + + KSY G   +R+ +LS++ G +  L+GPNGAGK+T   ++ GL     G + I 
Sbjct: 334 LDVESVTKSYAGVVALREATLSVEPGTVHALIGPNGAGKSTFINVVAGLYAPTSGHIRIG 393

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRD----------- 112
            +DV+  P H RAR G+    Q   + + +SV +N+M  +E R+ L  D           
Sbjct: 394 GVDVTDLPAHRRARLGLVRTFQNLQLIQGVSVLENVMLGMERRRGLAADVLAFLGGSGHE 453

Query: 113 -GRRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPI 171
              R E  S+L    I H+ D     LS G R+ VE+ARA+A  P  +LLDEP AGV+P 
Sbjct: 454 ARERAEAASILAFLGIGHLADMKPKDLSYGHRKLVELARAIAQKPAILLLDEPVAGVNPQ 513

Query: 172 SVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVK 231
              ++ +I+  L+  GI VL+ +HN+   + + +   +++ G  IA G    +  +  V 
Sbjct: 514 EAREVARIVAKLRDAGISVLLVEHNMEFVMGLADRVTVLDFGNPIASGTPAEVQKDPKVI 573

Query: 232 EVYLG 236
             YLG
Sbjct: 574 RAYLG 578