Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 602 a.a., Vitamin B12 import ATP-binding protein BtuD from Xanthobacter sp. DMC5

 Score =  142 bits (359), Expect = 1e-38
 Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 4/234 (1%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           LKA  ++K++ G   VRDVS+ + SG+I+G++GPNGAGKTT F ++ G ++   G +  D
Sbjct: 355 LKASGVSKNFGGVFAVRDVSIDVRSGEILGIIGPNGAGKTTLFSLLAGSLKPSSGSITFD 414

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELE-SLL 122
              ++  P H   RAGIG   Q    F  L+VA+ + A     +    +G    +  S+L
Sbjct: 415 GRQIAGLPSHEICRAGIGRTFQITRAFPTLTVAETVYAAALVGRP---EGEAAAIAGSVL 471

Query: 123 QEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHH 182
               +   RD     ++   +RR+EIARALAT P+ ILLDE  AG+ P  + D  ++I  
Sbjct: 472 SLTRLDPYRDVASADVTLAVQRRLEIARALATRPRLILLDEIMAGLTPREINDAIELIRS 531

Query: 183 LKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLG 236
           ++  G+ V+  +H++R  + + +   +++ G LIAEG    +  +  V E YLG
Sbjct: 532 IRDSGVTVIFIEHHIRAVMALSDRIVVLDAGELIAEGVPSDVARDPRVVEAYLG 585