Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  137 bits (344), Expect = 3e-37
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 14/249 (5%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L+ + L   + G   V D+S  + +G+I  ++GPNGAGK+T F MI G+ +   G +  D
Sbjct: 11  LEVEGLTCRFAGVTAVDDLSFRVKAGEIKAVIGPNGAGKSTLFNMIAGVTRPTDGAIKFD 70

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETR------------KDLDR 111
              V   P H RAR GI    Q   IFR++SV +N+M     R              +  
Sbjct: 71  GARVDRLPTHARARRGIARTFQNLQIFREMSVLENVMVGRHLRGRATTLSALLHIPSVGA 130

Query: 112 DGRRKELES--LLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVD 169
           + R  E  +  LL+ F ++        SL+ G+ + +E+ARALA+ P+ +LLDEP AG+ 
Sbjct: 131 EERAMEATAMALLERFGLAAKAGLPAGSLAFGQMKVLELARALASEPRLLLLDEPAAGLP 190

Query: 170 PISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANEL 229
                 + + I  L   G+ VL+ +HN+R  + +     ++N+GR IAEG AE +  +  
Sbjct: 191 HAEADKMAETIRDLNRDGMTVLLVEHNMRMVMSLSHDILVLNNGRRIAEGTAEDVRRHPE 250

Query: 230 VKEVYLGHE 238
           V   YLG E
Sbjct: 251 VLSAYLGEE 259