Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 235 a.a., High-affinity branched-chain amino acid transport ATP-binding protein LivF from Xanthobacter sp. DMC5

 Score =  139 bits (349), Expect = 6e-38
 Identities = 75/235 (31%), Positives = 132/235 (56%), Gaps = 4/235 (1%)

Query: 1   MATLKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRV 60
           MA L+ + L+  Y    VV D++  I+ G+IV L+G NGAGKT+    ++GL+   +GRV
Sbjct: 1   MAMLEVEKLSAWYGPSHVVHDLTFKIEQGEIVALVGRNGAGKTSTLRAVMGLMPRAEGRV 60

Query: 61  LIDNLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELES 120
             D  D+     H R R G+GY+P++  I   L+V +N+   L       R   R  ++ 
Sbjct: 61  TFDGTDLLPLGAHARFRLGLGYVPEDRRIVPGLTVRENLQLGLVA---AGRTDERAAIDE 117

Query: 121 LLQEF-HISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQI 179
           + + F  +    +  G ++SGGE++ + IARA+ + PK +LLDEP  G+ P+ V ++  +
Sbjct: 118 IAKSFPRLKERLEQQGTTMSGGEQQMLAIARAIISKPKMVLLDEPSEGIMPVLVEEMGVL 177

Query: 180 IHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVY 234
              L+ +G  +L+ + NV   L++   A I++ G L+ +  A  +LA++ +++ Y
Sbjct: 178 FRRLRDQGTTLLLVEQNVEWALNLASRAIIIDQGELVHQSSAAALLADKDIQDRY 232