Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 231 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score =  133 bits (334), Expect = 3e-36
 Identities = 78/233 (33%), Positives = 131/233 (56%), Gaps = 8/233 (3%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L  +++   Y    V+  VSL+++ G++V LLG NGAGKTT    I+G++   +G++  +
Sbjct: 2   LIVENIHSYYDKSHVLEGVSLTVNPGELVTLLGRNGAGKTTTLRSILGIICPRKGQIHFN 61

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELESLLQ 123
              +  Q +   AR G+  +P+   IFR L+V +N+   + TRK       R +LE +  
Sbjct: 62  GQALVGQKIFEIARQGLALVPENRGIFRLLTVEENLR--IATRKT-----SRWQLEDVYG 114

Query: 124 EF-HISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHH 182
            F  +   R N G +LSGGE++ + IARAL   PK ++LDEP  G+ P+ V ++ +I+  
Sbjct: 115 MFPRLKERRKNAGHALSGGEQQMLAIARALLNDPKLLILDEPTEGLAPVIVDELVKILRK 174

Query: 183 LKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYL 235
           +K  G+ VL+ + N+     + +  Y++  GR++ EG AE   A+  +K  YL
Sbjct: 175 VKDDGLPVLLVEQNLMVCDKLADRHYVLEQGRVVYEGSAEAFRADPTIKNRYL 227