Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 254 a.a., Phenylacetate ABC transporter, ATP-binding protein 1 from Variovorax sp. SCN45

 Score =  132 bits (333), Expect = 5e-36
 Identities = 83/249 (33%), Positives = 133/249 (53%), Gaps = 18/249 (7%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L+   +   + G + +  VS S   G+I+ ++GPNGAGKTT F +I GL +   G+V I 
Sbjct: 5   LEVAEVGIDFGGLRALDCVSFSAAPGEILAVIGPNGAGKTTLFNVISGLYRPRAGQVRIG 64

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIM----------------AILETRK 107
           N  V+    H  A+ G+    Q   IF+ +S  +N++                A+   R+
Sbjct: 65  NEVVTGLAPHQLAQRGLTRTFQNLQIFQSMSAIENVLVGRHLRERHGILAHALALPSVRR 124

Query: 108 DLDRDGRRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAG 167
           +  ++ R   +ESL +   + ++ D    SLS G  +R+EIARALA  PK +LLDEP AG
Sbjct: 125 E-QQESRSLAMESL-RAVGLENLADRAAASLSYGALKRLEIARALAAGPKVLLLDEPAAG 182

Query: 168 VDPISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILAN 227
            +P    +I  II  + A G+ +++ +H++R  + I +   ++N GR IA G AE + ++
Sbjct: 183 CNPSETEEISAIICKIAATGVTIVLVEHDMRMVMKISDHIVVLNFGRQIASGSAEEVRSD 242

Query: 228 ELVKEVYLG 236
             V E YLG
Sbjct: 243 SAVIEAYLG 251