Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 267 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  138 bits (347), Expect = 1e-37
 Identities = 79/249 (31%), Positives = 134/249 (53%), Gaps = 14/249 (5%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L  +++++ + G +V++DV+L I  G I GL+GPNGAGKTT F +I GL+    G +   
Sbjct: 7   LTLKNVSRHFGGLKVLQDVNLDIPKGGIFGLIGPNGAGKTTVFNLITGLLPTTSGTIHFQ 66

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDG---------- 113
             D++ +      R GI    Q   IF+++S+ +N+   ++ +      G          
Sbjct: 67  GQDLAGRKPFQITRGGIARTFQNIRIFKEMSLLENVTVGMDAKLRYGPLGLLASTGMFRS 126

Query: 114 ----RRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVD 169
                R     LL    + H  +++  +LS G++R++E+ARALAT P  +LLDEP AG++
Sbjct: 127 EEKRARDRARELLSWVKLDHKANDVADNLSYGDQRKLELARALATEPTLLLLDEPVAGMN 186

Query: 170 PISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANEL 229
                ++   I ++ A+G  V + +H++R  + +C+   ++N GR+IA G  E I  +  
Sbjct: 187 STEKSELMVEIENIAARGFTVFMIEHDMRFVMGLCQQIAVLNFGRIIARGGPEQIRNDPQ 246

Query: 230 VKEVYLGHE 238
           V E YLG E
Sbjct: 247 VIEAYLGRE 255