Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 259 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  132 bits (331), Expect = 9e-36
 Identities = 81/247 (32%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L  + ++K + G Q + DV ++I  GQ+ GL+GPNGAGKTT F +I GL   + G   + 
Sbjct: 9   LDVRGISKRFGGLQALSDVGITIKRGQVYGLIGPNGAGKTTFFNVITGLYTPDSGTFELA 68

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIM-------------AILETRK-DL 109
                   +H  A+AGI    Q   +F +++  +N+M             A+L T     
Sbjct: 69  GKPYQPTAVHEVAKAGIARTFQNIRLFAEMTALENVMVGRHIRTNSGVFGAMLRTGSFKA 128

Query: 110 DRDGRRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVD 169
           +     K    LL    I    D    +LS G++RR+EIARALAT P+ I LDEP AG++
Sbjct: 129 EEAAIAKRAHELLDYVGIGKFADYKARTLSYGDQRRLEIARALATDPQLIALDEPAAGMN 188

Query: 170 PISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANEL 229
                 ++++I  ++     +LI +H+V+  + +C+   +++ G+ IAEG    +  NE 
Sbjct: 189 LTEKVALRELIDRIRRDNRTILIIEHDVKLIMGLCDRVTVLDYGKQIAEGTPVDVQKNEK 248

Query: 230 VKEVYLG 236
           V E YLG
Sbjct: 249 VIEAYLG 255