Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 246 a.a., ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  137 bits (344), Expect = 3e-37
 Identities = 77/235 (32%), Positives = 128/235 (54%), Gaps = 4/235 (1%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L  ++L+  Y    V+ D++L +D+ ++V L+GPNGAGKT+    I G V A  G V   
Sbjct: 2   LNIENLSCGYGAAVVLHDLNLHVDAAEVVALIGPNGAGKTSTLQCIAGHVPARSGSVRFG 61

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELESLLQ 123
            +D++  P H R   GI   P+   +F  ++V +N++    +R    R    + ++ +L 
Sbjct: 62  GMDLAPLPAHKRVLEGIALSPEGRKLFGDMTVRENLVVGGYSRP---RQATARNMQRVLD 118

Query: 124 EF-HISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHH 182
            F  ++   D+LG +LSGGE++ V I RAL   PK +L+DE   G+ P +V    Q +  
Sbjct: 119 LFPRLAERFDSLGRTLSGGEQQMVAIGRALMAEPKLLLIDELSLGLMPKNVDICYQALRR 178

Query: 183 LKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLGH 237
           L+  GI VL+ + N+ + L+  + AY++  GRL+  G +E   +   + E  LGH
Sbjct: 179 LREDGIAVLLVEQNLSKALEFSDRAYVLESGRLVWSGTSEAARSRRDLVEAILGH 233