Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 253 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  131 bits (329), Expect = 1e-35
 Identities = 74/231 (32%), Positives = 130/231 (56%), Gaps = 5/231 (2%)

Query: 9   LAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLIDNLDVS 68
           +++S+ G + V++VSLS+  G +  L+GPNGAGKTT F ++ G ++ + G V     D++
Sbjct: 11  VSRSFGGLKAVQNVSLSVHEGSLSALIGPNGAGKTTLFALMSGFLRPDAGTVRFAGQDIT 70

Query: 69  HQPMHGRARAGIGYLPQEASIFRKLSVADNIM--AILETRKDLDRDGRRKELESLLQEFH 126
            Q  H  A  G+    Q    F   +V +NI   A L  R   +R    K  E++ Q   
Sbjct: 71  GQEPHRNAALGMTRTFQIVKPFAAQTVRENIAVGAHLHVR---NRGEALKTAEAVAQRVG 127

Query: 127 ISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHHLKAK 186
           ++   D     L+   R+R+E+ARALAT P+ +LLDE  AG++P  + ++  ++  +   
Sbjct: 128 LAPQLDKPASDLTVAGRKRLELARALATRPRLLLLDEVLAGLNPQEIAEMMPVVRGIADS 187

Query: 187 GIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLGH 237
           G+ VL+ +H ++  + + E  +++  G+LIA+G+   + +++ V E YLGH
Sbjct: 188 GVTVLMIEHVMQAVMHLAEHVWVLAQGQLIAQGNPAQVTSDDRVVEAYLGH 238