Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 275 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Sphingobium sp. HT1-2

 Score =  257 bits (656), Expect = 2e-73
 Identities = 125/233 (53%), Positives = 174/233 (74%), Gaps = 1/233 (0%)

Query: 9   LAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLIDNLDVS 68
           +AKSY  R V+ DVSL++  G++VGLLGPNGAGKTTCFY ++GLV+ +QGR+++D  D++
Sbjct: 44  IAKSYDKRVVLSDVSLTVGKGEVVGLLGPNGAGKTTCFYSVMGLVRPDQGRIILDGQDIT 103

Query: 69  HQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRDGRRKELESLLQEFHIS 128
             PM+ RA  G+GYLPQE SIFR L+V  NI A+LE  +  ++  R ++LE LL EF ++
Sbjct: 104 GLPMYRRAILGLGYLPQETSIFRGLTVEQNIGAVLEMAEP-NKAARAEKLEQLLDEFGLT 162

Query: 129 HIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHHLKAKGI 188
            +RD+  M+LSGGERRR EIARALA  P  +LLDEPFAG+DP+S+ DI+ ++  LK +GI
Sbjct: 163 RLRDSAAMALSGGERRRCEIARALAADPSIVLLDEPFAGIDPLSIADIRDLVKQLKTRGI 222

Query: 189 GVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLGHEFRL 241
           GVLITDHNVRETL+I + A I+  G+++  G    ++A+  V+ +YLG  F+L
Sbjct: 223 GVLITDHNVRETLEIVDRACIIYSGQVLFAGSPTELVAHPDVRRLYLGENFQL 275