Pairwise Alignments

Query, 241 a.a., lipopolysaccharide ABC transporter, subunit LptB from Pseudomonas putida KT2440

Subject, 244 a.a., LPS export ABC transporter ATP-binding protein from Magnetospirillum magneticum AMB-1

 Score =  286 bits (732), Expect = 3e-82
 Identities = 146/239 (61%), Positives = 184/239 (76%), Gaps = 3/239 (1%)

Query: 4   LKAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAEQGRVLID 63
           L A+++ KS+KGR V+RDVS+S+  G+ VGLLGPNGAGKTTCFY I GL+  + G +L+D
Sbjct: 8   LVARNIGKSFKGRPVLRDVSISVQRGEAVGLLGPNGAGKTTCFYCITGLINPDMGAILLD 67

Query: 64  NLDVSHQPMHGRARAGIGYLPQEASIFRKLSVADNIMAILET-RKDLDRDGRRKELESLL 122
             +++  PM+ RAR GIGYLPQEASIFR LSV  NIMA+LE    DL+R  R+ +LESLL
Sbjct: 68  GTEITDLPMYRRARLGIGYLPQEASIFRGLSVEGNIMAVLEVVEPDLER--RQHDLESLL 125

Query: 123 QEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHH 182
            EF ISH+R    M+LSGGERRRVEIARALA  P FILLDEP AG+DPI+V DI+ ++ H
Sbjct: 126 AEFSISHLRRAPAMALSGGERRRVEIARALACRPHFILLDEPLAGIDPIAVSDIRDLVAH 185

Query: 183 LKAKGIGVLITDHNVRETLDICETAYIVNDGRLIAEGDAETILANELVKEVYLGHEFRL 241
           LK +GIGVLITDHNVRETLD+ + AYI++DG ++ EG    I+A+E V+ VYLG  F +
Sbjct: 186 LKHRGIGVLITDHNVRETLDLIDRAYILHDGSVLMEGRPAEIVAHEGVRRVYLGERFSM 244