Pairwise Alignments

Query, 284 a.a., putative ATP-binding protein UPF0042 from Pseudomonas putida KT2440

Subject, 312 a.a., RNase adapter protein RapZ from Sphingobium sp. HT1-2

 Score =  184 bits (467), Expect = 2e-51
 Identities = 107/286 (37%), Positives = 161/286 (56%), Gaps = 6/286 (2%)

Query: 3   LIIVSGRSGSGKSTALDVLEDSGFYCIDNLPAGLLPQLAENALI---NTELLQPKVAVSI 59
           +++VSG SG+GK+TAL  LED G+  +DNLP  LL +L +  L      E  +P +A+ I
Sbjct: 9   ILLVSGLSGAGKTTALKTLEDMGWEVVDNLPLVLLDRLLDTPLPAGHGGEDDRP-LALGI 67

Query: 60  DARNLPSHLMRFPELLEEARARH-IQCDVLYLDADEEVLLKRFSETRRRHPLTNANRSLA 118
           DAR          + ++  R RH    + L+LD     L +R++ETRRRHPL   +R  A
Sbjct: 68  DARTRGFDANAIVQRIKALRERHGHDIETLFLDCSGAELERRYAETRRRHPLAQ-DRPAA 126

Query: 119 EAIRVESDLLGPIADLADLKIDTTNLNLYQLRDSIKLRLLNQPEPGTAFLVESFGFKRGM 178
           + I  E +L  P+   +   IDTT+L+   L+  ++ R   +        + SFG+ RG+
Sbjct: 127 DGIARERELTEPLRRWSAQLIDTTSLSTNALQQEMRARFAREQLSDPVLTILSFGYSRGV 186

Query: 179 PVDADLVFDVRCLPNPYWKPELREHSGLDQPVIDYLAAQPDVEDMYNDISSYLLKWLPRF 238
           P + DL+FD+R L NP+W  +LR  +GLD  V  Y+ A P  ++    I   L   LPR+
Sbjct: 187 PRNVDLMFDMRFLRNPFWDEDLRPKTGLDADVAAYIQADPAYQEALGKIQDLLTTLLPRY 246

Query: 239 AASNRAYVTIAIGCTGGHHRSVYITERLGRQLQQTLKNVQVRHRDL 284
           A + + Y+T+A GCTGG HRSV++ E + R LQ    +  V HR++
Sbjct: 247 AEAGKTYITVAFGCTGGRHRSVHVAEHVARYLQDAGFSPTVSHRNM 292