Pairwise Alignments

Query, 453 a.a., aromatic amino acid transport protein from Pseudomonas putida KT2440

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  399 bits (1026), Expect = e-116
 Identities = 202/450 (44%), Positives = 292/450 (64%), Gaps = 6/450 (1%)

Query: 10  LQRGLKNRHIQLIALGGAIGTGLFLGIAQTIQLAGPSVLLGYAIAGLMAFLIMRQLGEMV 69
           L+R L  RHI+L+ALG  IG GLFLG A+ I++AGP+++L Y I GL   +IMR LGEM 
Sbjct: 18  LKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPAIMLSYIIGGLAILVIMRALGEMA 77

Query: 70  VEEPVAGSFSHFAHQYWSEFAGFVSGWNYWVVYVLVGMAELTAVGIYVQYWWPDFPTWAT 129
           V  PVAGSFS +A  Y    AGF++GWNYW ++++  +AE+TAV +Y+  W+PD P W  
Sbjct: 78  VHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAVAVYMGVWFPDTPRWIW 137

Query: 130 AAIFFVVINLINLTQVKVYGEMEFWFALVKVVAIVSMI--GFGAWLLGSGHGGPDASVAN 187
           A    + +  INL  VK +GE EFWFAL+K+V I++M+  G G    G G+ G    ++N
Sbjct: 138 ALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGIIAFGFGNDGVALGISN 197

Query: 188 LWQYGGFFPNGVTGLVMALAVIMFSFGGLELVGITAAEADNPRESIPKATNQVVYRILIF 247
           LW +GGF PNGV G++M+L ++MF++ G+E++G+TA EA NP+++IP A   V +RIL+F
Sbjct: 198 LWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQKTIPSAIGSVFWRILLF 257

Query: 248 YIGALAVLLSLYPWQKVVQGGSPFVMIFHELDSDLVATILNIVVLTAALSVYNSCVYANS 307
           Y+GAL V+LS+YPW ++   GSPFVM F  L     A I+N VV+TAALS  N  +++  
Sbjct: 258 YVGALFVILSIYPWNEIGTQGSPFVMTFERLGIKTAAGIINFVVITAALSSCNGGIFSTG 317

Query: 308 RMLFGLASQGDAPRQLLKVSRSGVPLTALAVSAFATGLCVLINYLMPGGAFGLLMALAVS 367
           RML+ LA  G AP    K S +GVP  AL +S FA  L VL+NYL+P   F  + ++A  
Sbjct: 318 RMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFALLLGVLLNYLVPEKVFVWVTSIATF 377

Query: 368 ALVINWASISITHLKFRKAKLAAGITPF-YKSLGHPLTNYLCLAFIVLILVVMYLTPPIR 426
             +  W  I +  LKFRK+   A      Y+   +P+++YL LAF++L++ +M   P  R
Sbjct: 378 GAIWTWLMILLAQLKFRKSLSPAEQAGLKYRMWLYPVSSYLALAFLLLVVGLMAYFPDTR 437

Query: 427 ISVMLIPAW---IAVLWVAFKLKKARQAKG 453
           I++ + P +   + VL+  FKL+  + A+G
Sbjct: 438 IALYVGPVFLVLLTVLFYVFKLQPTQVAQG 467