Pairwise Alignments

Query, 315 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 314 a.a., permease from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 8e-18
 Identities = 75/318 (23%), Positives = 129/318 (40%), Gaps = 36/318 (11%)

Query: 15  APVFAMLFMGVLLKRIHLIDDNFNRVASQLVFNVCMPALLFLGIYHADLAAAVKPGV-IL 73
           AP+F ++ +G L  +  L+  +   + S  VF + +P L+F  +  A+   A    + I 
Sbjct: 9   APIFILILIGWLTVKAGLLRADAGDILSDFVFKIAVPTLIFRTLAEANFHGASPFRLWIT 68

Query: 74  YFIVATLVGFAIAWGMA------IWRSPMADRGIYTQGAFRGNNGVIGLALAASLYGDYG 127
           YF      G A+ W         +++  +    I    +   NN  IGL L     GD G
Sbjct: 69  YF-----AGVAVTWAFGHIVTRYVFKQDVRIAVIAGISSAFANNIFIGLPLVGRSVGDEG 123

Query: 128 ISLGAVLAGL---------VILMYNSLSAVV-------LAVYSPDLKSDPWSICKSIFSN 171
           +   ++L  +          ILM N+    V        AV+          + +++ +N
Sbjct: 124 LVALSILLAIHLPVMMIAGTILMENATHKAVGGEKRGMAAVFK--------QVGRNLVTN 175

Query: 172 PLIISVLVAAPMAYGQVPLPNWLLTSGDYLAQMTLPLALICIGGTLSLAALRNCGRLAID 231
           PL+I + +        V L   L T  D +A M  P ALI +G  L+   +R    +A+ 
Sbjct: 176 PLVIGLAIGLSTNVSGVALTPILKTVVDQVASMAGPAALISLGMALTKYTIRGNMGIAVT 235

Query: 232 ASFVKMLWLPLLGTLGAWLCGFRGAELGILFLYIGSPTAAASYVMARAANGNHELAASII 291
            +  K+L LP          G        L L    PT   ++++A      H +AAS I
Sbjct: 236 MTVFKLLLLPACVWAMGHALGLSREWTAALVLTSSVPTGVNAWLIANRFGIGHSVAASTI 295

Query: 292 VITTLMAAITTNIGIFIL 309
            I+T    ++ ++  ++L
Sbjct: 296 SISTATGVLSVSLWAWLL 313