Pairwise Alignments

Query, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 698 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  336 bits (862), Expect = 2e-96
 Identities = 181/439 (41%), Positives = 272/439 (61%), Gaps = 9/439 (2%)

Query: 252 AENSLQRMAQYDFLTGLPNR----QQLQQQLDKILVDGGRLQHRVAVLCVGLDDFKGINE 307
           A   L  +A +D LTGLPNR     ++QQ +  +   GG      A++ + LD FK +N+
Sbjct: 255 ANQELTHLALHDMLTGLPNRTLLADRIQQAMQVVKEQGGCF----ALMFIDLDGFKPVND 310

Query: 308 QFSYQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELAQSILDDL 367
            F + +GDQLL  +  RLR        LAR+GGD+F L+   + QP +A  LA+  +  +
Sbjct: 311 AFGHHMGDQLLREVGLRLREDLRSQDTLARIGGDEFVLL-VQLTQPDDALGLAERQVILI 369

Query: 368 EVPFDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQFYIASVDS 427
              F +   ++++ A++GI +FP +G + ++LL  A+  M  AK   +N Y F+ AS+++
Sbjct: 370 NRAFQVAEHELKISASVGIAMFPGNGHNPQELLMNADAAMYHAKGMGKNGYSFFDASMNT 429

Query: 428 EMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMVPPDQFIP 487
             R++ +L +DLR A+ + Q  L YQP+        VG EALLRW+HP+ G++ P  FI 
Sbjct: 430 NARKQLQLLQDLRNAVEQEQFRLYYQPKCDAVSGIPVGAEALLRWEHPQQGLLLPAMFIE 489

Query: 488 LAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRVVNNLLQA 547
           LAE+ G II IGEWVL++ACRQ+  W+ QG+ D R+AVNLS +Q  H+ L + V + L+ 
Sbjct: 490 LAEKTGLIIPIGEWVLNEACRQMSLWYAQGYEDWRIAVNLSALQFCHAGLVKSVADALER 549

Query: 548 YRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDK 607
           ++LP  +L LE+TET  M D   +   L  L   G  ++IDDFGTGYSSL YLK LP ++
Sbjct: 550 HQLPANNLTLEITETTAMSDADASMTVLQQLSDMGVDLSIDDFGTGYSSLMYLKRLPANE 609

Query: 608 IKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQGCHEGQGY 667
           +KID+ FV+DL  D DDA IV AI+ LG++LG++++AEGVET  Q++++   GC+  QGY
Sbjct: 610 LKIDRGFVRDLEHDSDDAAIVSAIVALGQALGLRIVAEGVETDVQQSFLTRLGCNSLQGY 669

Query: 668 HYSKPLSARELTHFLKQAQ 686
               PL A      +++A+
Sbjct: 670 LLGHPLPAEGFMTDIQRAE 688