Pairwise Alignments

Query, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  326 bits (836), Expect = 3e-93
 Identities = 177/454 (38%), Positives = 269/454 (59%), Gaps = 3/454 (0%)

Query: 235  ANQLLASIERNTHLRHEAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAV 294
            ++ +  SI+ +   R EA   ++ +A +D LT LPNR    ++L   L    R   RV V
Sbjct: 602  SHYIFTSIDVSDRKRSEAR--IRFLAHHDVLTELPNRSLCIERLGLALQQAQRKGQRVGV 659

Query: 295  LCVGLDDFKGINEQFSYQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPY 354
            L + LD FK IN+   + VGD LL ++A R+         ++RLGGD+F +V  N+    
Sbjct: 660  LFIDLDRFKNINDSLGHHVGDALLRSVAARMSQAVRPGDTVSRLGGDEFVVVLNNVADGQ 719

Query: 355  EAAELAQSILDDL-EVPFDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKAR 413
            E   L +  L  L   P D+D  +I +  ++GI ++P+D    + L++ A+  M  +KA 
Sbjct: 720  EILSLVERRLISLIRQPHDIDGAEIHVSCSVGIAVYPDDAQDIDALMRHADVAMYQSKAS 779

Query: 414  SRNRYQFYIASVDSEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQ 473
             R+  +F+   ++   ++R +LE  LR A+ R++L L YQP+I      ++ VEALLRWQ
Sbjct: 780  GRDTARFFTPEMNERAQQRLQLESSLRHAIERDELSLHYQPRIDAHSGELICVEALLRWQ 839

Query: 474  HPELGMVPPDQFIPLAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLH 533
              ELG V P QFIP+AE++G I++IG WV++QAC Q   W   G   +R+A+N+S +QL 
Sbjct: 840  SAELGQVRPAQFIPIAEESGQIVAIGAWVIEQACAQHAAWRRDGLGAIRVAINMSALQLR 899

Query: 534  HSELPRVVNNLLQAYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTG 593
               L  V+   +  Y + P  LE+E+TE+ LM+    +   L +L+  G +++IDDFGTG
Sbjct: 900  DGGLLEVLRGAIALYGVSPGDLEIELTESTLMDAAEQSLVQLHALKSLGVMLSIDDFGTG 959

Query: 594  YSSLSYLKSLPLDKIKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQE 653
            YSSL+YL   P+DK+KID+SF+  +L D  D  I RAII LG +LG++V+AEGVE  E+ 
Sbjct: 960  YSSLNYLNRFPIDKLKIDRSFIHKMLGDPTDMAIARAIIGLGHTLGLRVVAEGVERREEA 1019

Query: 654  TYIVAQGCHEGQGYHYSKPLSARELTHFLKQAQR 687
              + A  C E QGY  S+P+ A +L  ++ QA R
Sbjct: 1020 DTLRAARCDELQGYLISRPMPAGKLAGWIAQASR 1053