Pairwise Alignments

Query, 693 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  336 bits (862), Expect = 4e-96
 Identities = 184/437 (42%), Positives = 263/437 (60%), Gaps = 12/437 (2%)

Query: 249  RHEAENSLQRMAQYDFLTGLPNRQQLQQQLDKILVDGGRLQHRVAVLCVGLDDFKGINEQ 308
            R  +E  + R+A YD LT LPNR   Q +L   L    R +  V ++ + LD FK IN+ 
Sbjct: 830  RKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDS 889

Query: 309  FSYQVGDQLLLALADRLRAHSGRLGALARLGGDQFALVQANIEQPYEAAELA-------- 360
              +  GD++L  +A RL A       +AR+GGD+F L+     QP    E+A        
Sbjct: 890  LGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLL----QPRPTREMALNRAIHVA 945

Query: 361  QSILDDLEVPFDLDHEQIRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKARSRNRYQF 420
            ++IL  L  PF L++ +  + A+IGI L P+DG    +L++ A+  M  AK R +N +QF
Sbjct: 946  ENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQF 1005

Query: 421  YIASVDSEMRRRRELEKDLREALPRNQLYLVYQPQISYRDHRVVGVEALLRWQHPELGMV 480
            Y A +++    R ELE DLR A+ +N+  L YQPQ S    R+ G EALLRW+HP  G+V
Sbjct: 1006 YQAEMNASALERLELESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLV 1065

Query: 481  PPDQFIPLAEQNGSIISIGEWVLDQACRQLREWHDQGFSDLRMAVNLSTVQLHHSELPRV 540
            PP  FIP+ E+ G ++ +G+WVL +A RQL+ WH       +++VN+S  Q    +L   
Sbjct: 1066 PPGDFIPVIEELGLVVDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTR 1125

Query: 541  VNNLLQAYRLPPRSLELEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYL 600
            + N+L+   LPP  LELE+TE+ LM +++ A Q L SL+  G  IA+DDFGTGYSSL+YL
Sbjct: 1126 IANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYL 1185

Query: 601  KSLPLDKIKIDKSFVQDLLDDDDDATIVRAIIQLGKSLGMQVIAEGVETAEQETYIVAQG 660
            K  P+D +KID++FV  L + + DA I RAII +  SL + VIAEGVET EQ  ++   G
Sbjct: 1186 KQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHG 1245

Query: 661  CHEGQGYHYSKPLSARE 677
            C E QGY + +P+ A +
Sbjct: 1246 CDEVQGYLFGRPMPAHQ 1262