Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 376 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  486 bits (1251), Expect = e-142
 Identities = 249/372 (66%), Positives = 304/372 (81%)

Query: 22  MLRRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMFTAPKPPITVAAAMAEQRPWQERLPA 81
           MLRRRMLIML VVLLIVL L GYKAFSIYQQIQ+F+ PKP ++VA A A ++PWQ R+ +
Sbjct: 1   MLRRRMLIMLGVVLLIVLLLAGYKAFSIYQQIQVFSKPKPAVSVAVATATEQPWQLRVSS 60

Query: 82  VGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLGLAK 141
           VG+LKALQGV+LSLE+ G VK + F+SGQ+VK GQ L+QL+   E+ALL TA ADLGLA+
Sbjct: 61  VGTLKALQGVNLSLEIAGTVKDVQFESGQKVKTGQPLVQLDSAVESALLETAQADLGLAQ 120

Query: 142 VDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRINAPFSGTIGIRQVD 201
           +D+GRGSQLVG  AIS+GEFDRLS+Q ++N+A V QLKA   KK I APF GTIGIRQVD
Sbjct: 121 LDYGRGSQLVGSQAISKGEFDRLSAQLQKNKATVNQLKASLAKKHIVAPFGGTIGIRQVD 180

Query: 202 IGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSAIN 261
           +G YLA+GTVIATLQD SSLYVDF +PE A+P ++ GQ V V+V+AYPG++FPGS+SAIN
Sbjct: 181 VGDYLASGTVIATLQDLSSLYVDFYIPEHAVPKVAPGQPVQVEVSAYPGEQFPGSISAIN 240

Query: 262 PKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVYV 321
           PKVE +TRN+LVRAT+ANP+GKLLPGMF  L +LLPNP PQ+VVPE AITYTLYGNSVY 
Sbjct: 241 PKVENSTRNVLVRATLANPEGKLLPGMFTRLDVLLPNPAPQIVVPEGAITYTLYGNSVYA 300

Query: 322 ASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLTP 381
            + +K + G+   D  G+P L+AE+R V+TGERR G+V+VS+GL+AGEQVV+AGQLKL  
Sbjct: 301 VAEKKTEGGEVEKDADGKPLLIAERRFVETGERRGGLVLVSKGLKAGEQVVSAGQLKLDN 360

Query: 382 GAAIRIGQDNAL 393
           G  I I  D  L
Sbjct: 361 GTPIAISPDKNL 372