Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score =  105 bits (263), Expect = 2e-27
 Identities = 109/400 (27%), Positives = 169/400 (42%), Gaps = 47/400 (11%)

Query: 24  RRRMLIMLA--VVLLIVLALGGYKAFSIYQQIQMF---TAPKPPITVAAAMAEQRPWQER 78
           R+R+++M    + L  +L   G  A ++++Q       TA  P + V            R
Sbjct: 9   RKRLMLMGVGGLTLAALLVANGLHARTLHEQSVTAWTETAAIPQVRVFQPQQNAAGDTLR 68

Query: 79  LPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLND---DQETALLGTAL- 134
           LPA   L+A     +   V G +K    D G QVKAGQ+L +++    DQ+ A     L 
Sbjct: 69  LPA--HLEAWSKAPIHARVSGYLKDWKADIGTQVKAGQILAEIDSPDLDQQMAQTHARLI 126

Query: 135 ---ADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVE-------QLKAQKIK 184
              A+  LA+    R   L+   ++SR E D  +S     +A  E       +L A +  
Sbjct: 127 QEQANARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEAAAADYARLSALESY 186

Query: 185 KRINAPFSGTIGIRQVDIGQYLAAGT----VIATLQDTSSLYVDFNVPEQALPHLSLGQQ 240
           K I APF+GTI  R  DIGQ + A T     +  + DT  L +   VP+     +  G +
Sbjct: 187 KTIRAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYAAVIHPGLE 246

Query: 241 VLVQVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQ 300
             + V  +PG+ F   L   +  ++  +  LL +    NP+G+LLPG +A   + +P   
Sbjct: 247 AELTVPEHPGEHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPIPADT 306

Query: 301 PQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVV 360
             V +P SA+ +   G  V             V D      L      +  GER    +V
Sbjct: 307 HGVSIPASALIFRAQGTQV------------AVLDAHNHVHLQTIHIGLDLGER----LV 350

Query: 361 VSEGLQAGEQVVTAGQLKLTPGAAIRIGQDNALKPEPGAA 400
           + +GL+  ++VV        P  A+R G    L    G A
Sbjct: 351 IDQGLKPVDRVVD------NPPDALREGDPVQLADASGGA 384