Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 3e-28
 Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 39/341 (11%)

Query: 81  AVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLND-------DQETALLGTA 133
           A+G++ A   V++   V G +  +HF  GQ+VKAG LL +++         Q    L   
Sbjct: 83  ALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQN 142

Query: 134 LADLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRIN----- 188
            A L  A+VD  R   L  + +I++   D   +Q  + Q +V+  +AQ    R+N     
Sbjct: 143 QAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQ 202

Query: 189 --APFSGTIGIRQVDIGQYLAAG--TVIATLQDTSSLYVDFNVPE----QALPHLSLGQQ 240
             AP SG +G+RQ+D+G  +AA   T +  +  T  + V F +PE      L     G  
Sbjct: 203 IRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTLPETELSTVLERYRSGAS 262

Query: 241 VLVQVAAYPGQRF--PGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPN 298
           + V+       +    G L +I+ +++ TT  L  +    N D  L P  F ++ +L   
Sbjct: 263 LPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVRLLADT 322

Query: 299 PQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGV 358
            +  V+ P +AI +   G   YV +                 Q     R +K G      
Sbjct: 323 LKQVVMAPAAAIQFGNDGTFAYVVN----------------EQSTVNVRKLKVGASDGEN 366

Query: 359 VVVSEGLQAGEQVVTAGQLKLTPGAAIRIGQDNALKP-EPG 398
            V+ +GL+AG+++V  G  +L  G  + + +D++  P  PG
Sbjct: 367 SVILDGLKAGDRLVLEGTDRLREGTKVEVVEDSSQVPTSPG 407