Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 374 a.a., MexH family multidrug efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  268 bits (685), Expect = 2e-76
 Identities = 153/374 (40%), Positives = 223/374 (59%), Gaps = 9/374 (2%)

Query: 22  MLRRRMLIMLAVVLLIVLALGGYKAFSIYQQIQMF-TAPKPPITVAAAMAEQRPWQERLP 80
           M  +RM+IMLA   ++   + G+ AF  +   Q F T PKP I+V  A A+   W+  +P
Sbjct: 1   MKAKRMIIMLAGSAIVFGGVFGFVAFKNHMIKQFFATMPKPVISVTTAKAQMVDWRVVVP 60

Query: 81  AVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDDQETALLGTALADLGLA 140
           AVG+L+A+ GVD+S  V G+VK++ F+SGQ VK GQ+L+QL+ D E   L +A A+LGLA
Sbjct: 61  AVGTLQAVNGVDISGSVAGLVKAISFESGQDVKRGQVLVQLDTDVEMGDLRSAQAELGLA 120

Query: 141 KVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKRINAPFSGTIGIRQV 200
           K    R  +LV    +S    ++  ++ +  QA V  L+AQ  KK I APF G +G+R++
Sbjct: 121 KTSHDRNMKLVRSDTVSVAALEKTEAELKVKQAKVGGLQAQIAKKTIAAPFDGRLGVRKI 180

Query: 201 DIGQYLAAGTVIATLQDTSSLYVDFNVPEQALPHLSLGQQVLVQVAAYPGQRFPGSLSAI 260
           D+GQY+  G ++  LQD S +  DF V ++ L  L +GQ V +   A+PG  F G ++AI
Sbjct: 181 DLGQYVQPGQMVVNLQDLSLMLCDFTVSQKDLSLLGIGQTVRMTTDAWPGVTFEGQVAAI 240

Query: 261 NPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVY 320
            P V+  T  + V+A   N +G+L PGMFA + I  P   P V VP SA+ Y L+G++V+
Sbjct: 241 EPLVDAKTGMVSVQARFPNAEGRLRPGMFARIEIERPAGAPVVTVPGSAVAYNLHGDAVF 300

Query: 321 VASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLT 380
           V       DGK V          AE+  V  GER+DG+VV+  G+ AG+ VVT+GQ+KL 
Sbjct: 301 VVKEEAGADGKTVSK--------AERVVVSLGERKDGLVVIKSGVAAGDVVVTSGQVKLE 352

Query: 381 PGAAIRIGQDNALK 394
            G+ I +   + LK
Sbjct: 353 HGSLIHVAASDPLK 366