Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 400 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  128 bits (321), Expect = 3e-34
 Identities = 101/345 (29%), Positives = 165/345 (47%), Gaps = 38/345 (11%)

Query: 65  VAAAMAEQRPWQERLPAVGSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLNDD 124
           V AA A  +     L  +G++ A   V +   V+G + ++HF  GQQVKAG LL +++  
Sbjct: 62  VQAATAVNKAVPRYLTGLGTITAANTVTVRSRVDGQLMAIHFQEGQQVKAGDLLAEIDPS 121

Query: 125 QETALLGTA-------LADLGLAKVDFGRGSQLVGDSAISRGEFDRLSS-------QYRR 170
           Q    L  A        A L  A+ D  R  QLV  + +SR E D   S         + 
Sbjct: 122 QFKVALAQAQGQLAKDKATLANARRDLVRYQQLVKTNLVSRQELDTQQSLVSETQGTIKA 181

Query: 171 NQAVVEQLKAQKIKKRINAPFSGTIGIRQVDIGQYLAAG--TVIATLQDTSSLYVDFNVP 228
           ++A V   + Q    RI AP  G +G++QVDIG  +++G  T I  +  T  + + F +P
Sbjct: 182 DEAAVASAQLQLDWSRITAPIDGRVGLKQVDIGNQISSGDTTGIVVITQTHPIDLVFTLP 241

Query: 229 EQALPHL----SLGQQVLVQV--AAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDG 282
           E  +  +      G+ ++V+    +   +   GSL +++ +++ TT  + ++A   N D 
Sbjct: 242 ESDIATVVQAQKAGKGLVVEAWDRSNKQKLSEGSLLSLDNQIDTTTGTIKLKARFNNQDD 301

Query: 283 KLLPGMFASLLILLPNPQPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQL 342
            L P  F +  +L+   +  VV+P +A+     GN V+V +           D+K     
Sbjct: 302 ALFPNQFVNARMLVATEENAVVIPTAALQMGNEGNFVWVLND----------DNK----- 346

Query: 343 VAEQRTVKTGERRDGVVVVSEGLQAGEQVVTAGQLKLTPGAAIRI 387
              +  VKTG +    VV++ GL AGE+VVT G  +LT GA + +
Sbjct: 347 -VSKHLVKTGIQDSQTVVIAAGLSAGERVVTDGIDRLTEGAKVEV 390