Pairwise Alignments

Query, 406 a.a., RND efflux membrane fusion protein-related protein from Pseudomonas putida KT2440

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  110 bits (274), Expect = 9e-29
 Identities = 91/328 (27%), Positives = 150/328 (45%), Gaps = 39/328 (11%)

Query: 83  GSLKALQGVDLSLEVEGIVKSLHFDSGQQVKAGQLLLQLND-------DQETALLGTALA 135
           G++  L  +++  +V G +  +  + GQ+V  GQ L +++        +Q  A L +A A
Sbjct: 55  GTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQAAYEQAQATLKSAKA 114

Query: 136 DLGLAKVDFGRGSQLVGDSAISRGEFDRLSSQYRRNQAVVEQLKAQKIKKR-------IN 188
           +L   K D  R   L    AI++ + D   +     ++ V   +AQ            I 
Sbjct: 115 NLERVKKDLARYEALDKQEAIAKQQLDYAKADILTAESQVSSAEAQVRSTLTDYNYSVIT 174

Query: 189 APFSGTIGIRQVDIGQYLAAG-TVIATLQDTSSLYVDFNVPEQALPHLSLGQQ------- 240
           APFSGT+GI QV +G  ++AG +++ TL     + VDF V E+ +   S   +       
Sbjct: 175 APFSGTVGISQVRLGAQVSAGQSLLNTLSSNDPVLVDFVVNERDVRRFSKMMKNESLPDS 234

Query: 241 -VLVQVAAYPGQRFPGSLSAINPKVEETTRNLLVRATMANPDGKLLPGMFASLLILLPNP 299
              +Q       R  G L+ I+  V   +  + +R    NPD +L+PGM  +L +L  + 
Sbjct: 235 TFTIQFGENDVYRHHGELTTIDRAVGRQSGTINMRVEFPNPDRELIPGMTLNLRVLNQDI 294

Query: 300 QPQVVVPESAITYTLYGNSVYVASPRKDKDGKPVYDDKGQPQLVAEQRTVKTGERRDGVV 359
             Q+ +P  A+T  +    VYV           V DD      V  Q+ V+ G +    +
Sbjct: 295 GDQIAIPFKAVTEQMGEYFVYV-----------VGDDS-----VVHQQNVQLGTKVGAEI 338

Query: 360 VVSEGLQAGEQVVTAGQLKLTPGAAIRI 387
           VV EGL+ G+++V  G  KL  GA ++I
Sbjct: 339 VVREGLKPGQKIVVEGIQKLREGAKVQI 366