Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1053 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  506 bits (1304), Expect = e-147
 Identities = 328/1040 (31%), Positives = 561/1040 (53%), Gaps = 41/1040 (3%)

Query: 7    FIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQP 66
            FI RP+ A V++L+I+L+G  +  KL I QYP +    I +   YPGA+A+T+Q  + Q 
Sbjct: 5    FIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDTVVQV 64

Query: 67   LQQSLASAEGIDYMTSVSRQNFSI-ISIYARIGADSDRLFTELLAKANEVRNKLPQDSED 125
            ++Q L   + + Y++S S  + S+ I++    G + D    ++  K N     LPQ+ + 
Sbjct: 65   IEQQLNGIDNLRYVSSDSNSDGSMTITVTFNQGTNPDIAQVQVQNKLNLATPLLPQEVQQ 124

Query: 126  PVLSKEAADASALMYVSFYSKE--MSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              +    +  + LM +   S++  M+   +++Y+   IQ  ++   G+ + ++ G+Q +A
Sbjct: 125  QGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTAGVGDFQVFGSQ-YA 183

Query: 184  MRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVV--TSVNAS----TELKSA 237
            MR+WLDP KL  + L+  DV+ A+   N   A G++ G   +  T +NA+    T L++A
Sbjct: 184  MRIWLDPSKLNNYQLTPVDVSTAISAQNVQVATGQLGGLPALPGTQLNATIIGKTRLQTA 243

Query: 238  EAFAALPLKTSGD-SRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVI 296
            E F  + +K + D S+V L DVAR+E+G +NY   + F+G P+  + IK    AN LD  
Sbjct: 244  EQFGNILMKVNTDGSQVRLKDVARIELGGQNYSIAAQFNGKPASGMAIKLASGANALDTG 303

Query: 297  KEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALR 356
            K +R  + +LE   P  +   + YD T  +  SI  V+ TL EA+++V +V+FLFL   R
Sbjct: 304  KAIRATVAQLEPFFPPGMKAVVPYDTTPVVTESISGVVHTLVEAIVLVFLVMFLFLQNFR 363

Query: 357  SVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHM-EE 415
            + +I  +T+P+ ++G    +   G+++N LT+  M+LAIGL+VDDAIVVVEN+ R M EE
Sbjct: 364  ATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMILAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGI 475
              SP +A ++   +I   +V + + L+AV  P+ F  G TG ++K+F++T+  A+ +S +
Sbjct: 424  HLSPKEATVKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMALSVL 483

Query: 476  VALTLSPMMCALLL------RREQNPSGLAHRLDQLFERLKGRYQRLLHATLDSR-PVVL 528
            VAL  +P +CA +L      +  Q   G     ++ F+R    Y+R +   +  + P  L
Sbjct: 484  VALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDRGVLSYERGVGNMIKHKIPAFL 543

Query: 529  VFAVIILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLFKAFP 588
            V+A++I  +I + ++     L P+EDQGVIF    +P  +  +      D          
Sbjct: 544  VYALVIAGMIWLFMRIPAAFL-PDEDQGVIFAQVQTPVGSTAERTQKVIDDMRIFLLNDK 602

Query: 589  E--------YYSSFQINGFN----GVQTGIGGFLLKPWNERERTQ--MELLPLVQAK-LE 633
            E          S F +NGFN    G  +G+   +LKPW+ER+ +    E+    Q   ++
Sbjct: 603  EGEPGEGKGVKSVFTVNGFNFAGRGQSSGLAFVMLKPWDERDASTSVFEIAKRAQGYFMQ 662

Query: 634  EISGLQIFGFNLPSLPGTGEGLPFQFVINTAG--DYPALLDVAQRIKTRAQESGKFAFLD 691
                  +F    PS+   G    F   +   G   +  L+    +    A +S   A + 
Sbjct: 663  TFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHDKLMAARNQFLGMAAQSKILAGVR 722

Query: 692  IDLAFDKPEVVVDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVER 751
             +   D+P+  + +D  KA+  G+++ ++  TLA  LG + +N F   GR  KV  Q E 
Sbjct: 723  PNGVNDEPQYELTVDDEKASAQGITLSSINQTLAIALGGSYVNDFIDRGRVKKVYVQGEA 782

Query: 752  PYRDNPGWLNNYYVKNDQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQGVPM--VSL 809
              R +P  LN +YV++D G+++PLS + +        +L+++  + A  I G P    S 
Sbjct: 783  ASRMSPEDLNKWYVRSDSGKMVPLSAIASGKWIFGSPKLSRYNGVAAMEILGTPAPGYST 842

Query: 810  GEALKTVQDIAREEAPEGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFR 869
            G+A+  V+ IA+ + P G  + + G + +    GS     + L+L ++FL LAA +ES+ 
Sbjct: 843  GDAMAEVERIAK-QLPAGIGYAWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWS 901

Query: 870  DPLVILVTVPLSICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDER 929
             P+ +++ VPL + GAL+   +   S +++ QVGL+  +GL +K+ ILIVEFA +L  E+
Sbjct: 902  IPIAVILVVPLGVVGALIATSMRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELH-EQ 960

Query: 930  GLSVREAIEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTL 989
            G  + EA  EA+ +RLRP++MT+ A + G++PL ++SGAG+ S+  IG  +  GM   T+
Sbjct: 961  GKGIVEAAIEASRMRLRPIIMTSMAFILGVLPLAISSGAGSGSQHAIGTGVIGGMITATV 1020

Query: 990  FTLFVLPCIYTLLAHKASAK 1009
              +F +P  +  ++     K
Sbjct: 1021 LAIFWVPLFFATVSAAGERK 1040