Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1050 a.a., Probable efflux pump membrane transporter TtgB from Pseudomonas putida KT2440

 Score =  521 bits (1341), Expect = e-151
 Identities = 342/1035 (33%), Positives = 557/1035 (53%), Gaps = 34/1035 (3%)

Query: 7    FIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQP 66
            FI RP+ A V++L+I+L+G  +  KL I QYP +    I +   YPGA+A+T+Q  + Q 
Sbjct: 5    FIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDTVVQV 64

Query: 67   LQQSLASAEGIDYMTSVSRQNFSI-ISIYARIGADSDRLFTELLAKANEVRNKLPQDSED 125
            ++Q L   + + Y++S S  + S+ I+     G + D    ++  K N     LPQ+ + 
Sbjct: 65   IEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQEVQQ 124

Query: 126  PVLSKEAADASALMYVSFYSKE--MSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              +    A  + L+ +   S++  M+   + +Y+   +Q  ++   G+ + ++ G Q +A
Sbjct: 125  QGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGAQ-YA 183

Query: 184  MRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVV--TSVNAS----TELKSA 237
            MR+WLDP KL  F L+  DV  AV   N   ++G++ G   +  T +NA+    T L++A
Sbjct: 184  MRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPALPGTQLNATIIGKTRLQTA 243

Query: 238  EAFAALPLKTSGD-SRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVI 296
            E F ++ LK + D S+V LGDVA+V +G ENY   + F+G P+  + +K    AN LD  
Sbjct: 244  EQFESILLKVNKDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANALDTA 303

Query: 297  KEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALR 356
            K +R  +  LE   P  +     YD T  +  SI  VI TL EAV++V +V++LFL   R
Sbjct: 304  KALRETIKGLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQNFR 363

Query: 357  SVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHM-EE 415
            + +I  +T+P+ ++G    +   G+S+N LT+ AMVLAIGL+VDDAIVVVEN+ R M EE
Sbjct: 364  ATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVMSEE 423

Query: 416  GKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGI 475
            G  P +A      +I   +V + + L+AV  P+ F  G TG ++++F++T+  A+ +S +
Sbjct: 424  GLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGLSVL 483

Query: 476  VALTLSPMMCALLLR------REQNPSGLAHRLDQLFERLKGRYQRLLHATLDSR-PVVL 528
            VAL  +P +CA +L+            G     ++ F+R    Y+R + A L ++ P +L
Sbjct: 484  VALIFTPALCATMLKPLKKGEHHTAKGGFFGWFNRNFDRSVNGYERSVGAILRNKVPFLL 543

Query: 529  VFAVIILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTP-LFKAF 587
             +A+I++ +I +  +       P EDQGV+F    +P  ++ +      DQ    L K  
Sbjct: 544  AYALIVVGMIWLFARI-PTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLKDE 602

Query: 588  PEYYSS-FQINGFN----GVQTGIGGFLLKPWNER--ERTQMELLPLVQAKLEEISGLQI 640
             +  SS F +NGFN    G  +G+   +LKPW+ER  E +   L    Q          +
Sbjct: 603  ADTVSSVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDAMV 662

Query: 641  FGFNLPSLPGTGEGLPFQFVINTAG--DYPALLDVAQRIKTRAQESGKFAFLDIDLAFDK 698
            F F  P++   G    F   +   G   +  L++   +   +A +S   + +  +   D+
Sbjct: 663  FAFAPPAVLELGNATGFDVFLQDRGGVGHEKLMEARNQFLAKAAQSKILSAVRPNGLNDE 722

Query: 699  PEVVVDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPG 758
            P+  + ID  +A+ +GV++  +  TL+  LG + +N F   GR  KV  Q E   R +P 
Sbjct: 723  PQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPSARMSPE 782

Query: 759  WLNNYYVKNDQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQGVPM--VSLGEALKTV 816
             L  +YV+N  G+++P S+           +L+++  + A  I G P    S GEA+  V
Sbjct: 783  DLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMAEV 842

Query: 817  QDIAREEAPEGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILV 876
            + IA  E P G  F + G + +    GS +   F L++  +FL LAA +ES+  P+ +++
Sbjct: 843  ERIA-GELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVVL 901

Query: 877  TVPLSICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREA 936
             VPL I GAL+   L   S ++Y  VGL+T IGL +K+ ILIVEFA +L  E+G S+ +A
Sbjct: 902  VVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELH-EQGRSLYDA 960

Query: 937  IEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLP 996
              EA  +RLRP++MT+ A + G+VPL +ASGAGA S+  IG  +  GM   T+  +F +P
Sbjct: 961  AIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLAIFWVP 1020

Query: 997  CIYTLLAHKASAKAP 1011
              +  ++    +K P
Sbjct: 1021 LFFVAVSSLFGSKEP 1035