Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1049 a.a., multidrug efflux RND transporter permease subunit from Dickeya dianthicola ME23

 Score =  529 bits (1363), Expect = e-154
 Identities = 331/1034 (32%), Positives = 562/1034 (54%), Gaps = 30/1034 (2%)

Query: 7    FIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQP 66
            FI RP+ A V++++++L G  A  KL I QYP +    + +T  YPGA+A+T+Q  +TQ 
Sbjct: 5    FIDRPIFAWVIAIMVMLTGTLAILKLPIAQYPTIAPPAVQITANYPGADAKTLQDTVTQV 64

Query: 67   LQQSLASAEGIDYMTSVSRQNFSI-ISIYARIGADSDRLFTELLAKANEVRNKLPQDSED 125
            ++Q++   + + YM+S S  + ++ I++     A+ D    ++  K       LPQ+ + 
Sbjct: 65   IEQNMNGIDKLLYMSSNSDSSGTVQITLTFDADANPDIAQVQVQNKLQLAMPLLPQEVQQ 124

Query: 126  PVLSKEAADASALMYVSFYSKE--MSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFA 183
              +S + + +S LM + F S +  M+   I D++   I+  ++ + G+ + ++ G Q +A
Sbjct: 125  QGVSVQKSSSSFLMVLGFVSDDNNMTPQDIADFVGASIKDPISRVRGVGDTQLFGAQ-YA 183

Query: 184  MRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGE------VKGEYVVTSVNASTELKSA 237
            MR+WLDP KL  + L+ +DV +A++  N   AAG+      V G+ +  S+ A T L S 
Sbjct: 184  MRIWLDPDKLNNYQLTTSDVVSAIQVQNNQIAAGQLGGTPPVPGQKLNASIIAQTRLNSP 243

Query: 238  EAFAALPLKTSGD-SRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVI 296
            E F  + LK + D S+V L +VA +E+G E+Y+ ++ ++G P+  +GIK    AN LD  
Sbjct: 244  EQFGNILLKVNQDGSQVRLNNVAHIELGGESYNVIARYNGRPAAGLGIKLATGANALDTA 303

Query: 297  KEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALR 356
              V+  + +L+   P+ L V   YD T F++ SI EV+KTL EA+++V VV++LFL   R
Sbjct: 304  SAVKEEITKLQPTFPAGLKVVYPYDTTPFVKISIHEVVKTLLEAIVLVFVVMYLFLQNFR 363

Query: 357  SVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHM-EE 415
            + LIP + +P+ ++G    +   GYS+N LT+ AMVLAIGL+VDDAIVVVEN+ R M EE
Sbjct: 364  ATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVMAEE 423

Query: 416  GKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGI 475
            G SP +A  +   +I   +V + + L+AV+ P+ F +G TGA++++F++T+  ++++S +
Sbjct: 424  GLSPKEATRKSMGQIQGALVGIALVLSAVFIPMAFSSGSTGAIYRQFSVTIVSSMVLSVL 483

Query: 476  VALTLSPMMCALLLRREQN---PSGLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAV 532
            VAL L+P +CA +L+   N     G     ++LF++    Y   +   L S    +V  +
Sbjct: 484  VALILTPALCATILKPITNHGEKKGFFGWFNRLFDKSTRHYTNSVANILRSTGRYVVVYL 543

Query: 533  IILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTPLF--KAFPEY 590
            +++  + +++    +   P EDQGV+  M   P  A  +       Q    +        
Sbjct: 544  LVVAGLGLMVTRLPSSFLPQEDQGVLLTMIQLPVGATQESTQKVLAQVNDYYLNSEKDNV 603

Query: 591  YSSFQINGF----NGVQTGIGGFLLKPWNERERTQMELLPLVQ---AKLEEISGLQIFGF 643
             S F +NGF     G   GI    LK W+ER     ++  ++        +I    +  F
Sbjct: 604  KSVFTVNGFGFAGRGQNMGIAFASLKDWDERSGAANKVDAIIGRAFGAFSQIKEAMVIPF 663

Query: 644  NLPSL--PGTGEGLPFQFV-INTAGDYPALLDVAQRIKTRAQESGKFAFLDIDLAFDKPE 700
            NLP++   GT  G  F+ +  N  G    +    Q +   AQ       +  +   D P+
Sbjct: 664  NLPAIIELGTASGFDFELIDQNNLGHDKLIAARNQLLGMIAQHPDTLVRVRPNGMEDMPQ 723

Query: 701  VVVDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWL 760
              ++ID+ KA  +GVS+ T+  TL+T LG   +N F   GR  KV  Q E  +R  P  +
Sbjct: 724  YRLEIDQEKAESLGVSISTINATLSTALGGTYVNDFIDRGRVKKVYVQAEAKFRMLPNDI 783

Query: 761  NNYYVKNDQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQG--VPMVSLGEALKTVQD 818
              +YV+   GQ++P S   +        +L ++  L +  + G   P  S GEA+  +++
Sbjct: 784  QKWYVRGTSGQMVPFSAFASSHWEYGSPRLERYNGLPSVELVGEAAPGKSTGEAMALMEE 843

Query: 819  IAREEAPEGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTV 878
            +A  + P G  FD+ G + Q    G+       ++  ++FL LAA +ES+  P  +++ V
Sbjct: 844  LA-TQLPPGIGFDWTGMSYQERLAGNQAPALIIISAIVVFLCLAALYESWSIPFSVMLVV 902

Query: 879  PLSICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIE 938
            PL + GA++   L     ++Y +VGL+T IGL +K+ ILIVEFA  L ++ G  + EA  
Sbjct: 903  PLGVFGAVMAASLRGLENDVYFKVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLVEATL 962

Query: 939  EAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCI 998
            +A  +RLRP+LMT+ A + G+ PL+++SGAG+ ++  +G  +  GM   T+  ++ +P  
Sbjct: 963  DAVRMRLRPILMTSLAFILGVAPLVISSGAGSGAQNAVGTGVMGGMITATVLAIYFVPVF 1022

Query: 999  YTLLAHKASAKAPA 1012
            + ++  + S K  A
Sbjct: 1023 FVVVRRRFSKKKEA 1036