Pairwise Alignments
Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440
Subject, 1052 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 540 bits (1391), Expect = e-157
Identities = 326/1034 (31%), Positives = 577/1034 (55%), Gaps = 40/1034 (3%)
Query: 4 TDTFIQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYI 63
++ FI+RPV A V+S++ILL+G + L + QYP + +++V+ Y GA+A+T++ +
Sbjct: 3 SEVFIKRPVTAMVISIVILLVGAISIVNLPVTQYPDITPPVVSVSANYTGADAKTVEQTV 62
Query: 64 TQPLQQSLASAEGIDYMTSVSRQNFSI-ISIYARIGADSDRLFTELLAKANEVRNKLPQD 122
P++ + G+ Y++S + + +++ +G D D ++ + + +LP+
Sbjct: 63 ATPIETQVNGTPGMAYISSTNTSTGQMNMNVTFDVGTDIDIATLDVQNRVSIAEPRLPEA 122
Query: 123 SEDPVLSKEAADASALMYVSFYSKEMSNPQ--ITDYLSRVIQPKLATLPGMAEAEILGNQ 180
+ ++ + S +M +S YS + ++ +++Y + ++ L +PG+ + +G Q
Sbjct: 123 VKRLGVTVRKRNPSIMMVISLYSPKGTHDTKFLSNYTNIFVKDALLRVPGVGDINAIG-Q 181
Query: 181 VFAMRLWLDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKG---------EYVVTSVNAS 231
F+MR+WL P KLA + +S ++VT A++ N AAG V G EY +T VN
Sbjct: 182 DFSMRVWLKPDKLAQYNISTSEVTAAIQEQNLQVAAGTVGGMPQLASQTFEYPIT-VNGK 240
Query: 232 TELKSAEAFAALPLKT--SGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPA 289
E K E F + ++T + S V L DVAR+E G +Y S+ +G P+ + + P
Sbjct: 241 LERK--EEFEDIIVRTDPTSGSLVYLKDVARIEFGEFDYGRFSTVNGEPAAILLVYQAPG 298
Query: 290 ANPLDVIKEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVF 349
+N +D + + + E+++ P+ ++ + +++ +Q SIDEV+ TL EA+++VI+VVF
Sbjct: 299 SNAIDTAEGIYNALDEMKATFPADMDYVVPFESVSVVQVSIDEVLHTLVEALILVIIVVF 358
Query: 350 LFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENI 409
LFL + R+ LIP++ IP+S++G F +G+++N LT+ VLAIG+VVDDAIVVVE
Sbjct: 359 LFLQSWRATLIPILAIPVSIVGTFIFFIPLGFTINTLTMFGFVLAIGIVVDDAIVVVEAA 418
Query: 410 HRHMEEGK-SPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAG 468
+++ + S +A L ++I PV+++ + LAAV+ P+GF+ G+ G ++++FA+T+A
Sbjct: 419 QHYIDSKRVSAKEATLLAMKDITAPVIAIALILAAVFIPVGFIPGIVGRMYQQFAITIAI 478
Query: 469 AVIISGIVALTLSPMMCALLLRR---EQNPSGL---AHRLDQLFERLKGRYQRLLHATLD 522
+V+IS VALTL+P +C+LLL+ +++ G+ ++ + FER+ Y + ++
Sbjct: 479 SVLISAFVALTLTPALCSLLLKPMEVKKDSKGINKFFYKFNTWFERVTSSYGNGVKKSIK 538
Query: 523 SRPVVLVFAVIILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQFTP 582
+ P+VL+ V I L + P ED+G +F+ P+ ++ A D+
Sbjct: 539 ATPLVLIILVCIYAGTVGLFQVKPTGFLPTEDEGRLFISLELPESSSTSRTRAIMDEMVE 598
Query: 583 LFKAFPEYYSSFQINGFNGV----QTGIGGFLLK--PWNERERTQMELLPLV---QAKLE 633
+ + I G N + ++ G F ++ PW+ER+ +L L+ K
Sbjct: 599 MITTTDGIRNVTGIGGLNAINFSFKSNSGTFFVQMDPWDERQDPSKQLFGLIGQLNQKFA 658
Query: 634 EISGLQIFGFNLPSLPGTGEGLPFQFVI--NTAGDYPALLDVAQRIKTRAQESGKFAFLD 691
I I P++PG G+ F F++ + GD V + A + + A
Sbjct: 659 AIKEANIIVVPPPAIPGLGQTGGFSFMLEQRSGGDIKEFEQVVGQFLGAANQRPEIAMAY 718
Query: 692 IDLAFDKPEVVVDIDRAKAAQMGVSMDTLGGTLATLLGEAEINRFTLEGRSYKVIAQVER 751
P V +DR KA ++GV++ + T++T +G A +N FT GR+++V+AQ +
Sbjct: 719 SFFTAKTPGYHVTVDREKAKKLGVAISDVFSTMSTYMGSAYVNDFTRYGRNFRVVAQADT 778
Query: 752 PYRDNPGWLNNYYVKNDQGQLLPLSTLITLTDRARPRQLNQFQQLNAAIIQG--VPMVSL 809
YR + L+ YYV N +G+ +PL ++ +N + + I G S
Sbjct: 779 AYRMDIKDLDQYYVMNREGKSVPLGAVVDYEIVENAPVINHYNLFRSTEINGNAAEGYSS 838
Query: 810 GEALKTVQDIAREEAPEGFAFDYAGAARQYVQEGSALWVTFGLALAIIFLVLAAQFESFR 869
G+AL ++++A E P G+ +D++G +R+ + G+ + F LA+ ++ L+LAA +ES+
Sbjct: 839 GQALAALEEVAAEVLPAGYGYDFSGLSREELASGNTTILIFALAIILVSLLLAALYESWS 898
Query: 870 DPLVILVTVPLSICGALLPL-FLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDE 928
P +L+ +PL GA+L L FL N+Y Q+GLVTLIGL +K+ ILIVEFA + R +
Sbjct: 899 VPFSVLLALPLGAFGAILALTFLPKLDNNVYAQIGLVTLIGLAAKNAILIVEFAKE-RVD 957
Query: 929 RGLSVREAIEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGT 988
G+ + A EA +RLRP++MT+ A + G+VPL L++GAGAV+R IG + GM T
Sbjct: 958 AGMPLLAATIEAVKLRLRPIVMTSLAFILGVVPLALSNGAGAVARQTIGWTVIGGMLAAT 1017
Query: 989 LFTLFVLPCIYTLL 1002
+FV+P +Y ++
Sbjct: 1018 FLAIFVVPVLYVVI 1031
Score = 52.8 bits (125), Expect = 1e-10
Identities = 37/157 (23%), Positives = 67/157 (42%)
Query: 853 ALAIIFLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGVSSMNIYTQVGLVTLIGLIS 912
AL ++ +V+ +S+R L+ ++ +P+SI G + ++N T G V IG++
Sbjct: 349 ALILVIIVVFLFLQSWRATLIPILAIPVSIVGTFIFFIPLGFTINTLTMFGFVLAIGIVV 408
Query: 913 KHGILIVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVS 972
I++VE A D + +S +EA A PV+ + +P+ G
Sbjct: 409 DDAIVVVEAAQHYIDSKRVSAKEATLLAMKDITAPVIAIALILAAVFIPVGFIPGIVGRM 468
Query: 973 RFDIGMVIATGMSIGTLFTLFVLPCIYTLLAHKASAK 1009
+ IA + I L + P + +LL K
Sbjct: 469 YQQFAITIAISVLISAFVALTLTPALCSLLLKPMEVK 505
Score = 45.4 bits (106), Expect = 2e-08
Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 4/189 (2%)
Query: 306 LESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLIP---V 362
LE L YD + + + T+ L +I+V L S +P +
Sbjct: 845 LEEVAAEVLPAGYGYDFSGLSREELASGNTTILIFALAIILVSLLLAALYESWSVPFSVL 904
Query: 363 VTIPLSMIGVLFFMQMMG-YSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPFD 421
+ +PL G + + + N+ + +V IGL +AI++VE ++ G
Sbjct: 905 LALPLGAFGAILALTFLPKLDNNVYAQIGLVTLIGLAAKNAILIVEFAKERVDAGMPLLA 964
Query: 422 AALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLS 481
A +E + P+V ++ P+ G + T+ G ++ + +A+ +
Sbjct: 965 ATIEAVKLRLRPIVMTSLAFILGVVPLALSNGAGAVARQTIGWTVIGGMLAATFLAIFVV 1024
Query: 482 PMMCALLLR 490
P++ ++ +
Sbjct: 1025 PVLYVVITK 1033