Pairwise Alignments

Query, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1020 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  653 bits (1685), Expect = 0.0
 Identities = 373/1012 (36%), Positives = 596/1012 (58%), Gaps = 11/1012 (1%)

Query: 8    IQRPVLASVVSLLILLLGFQAWNKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPL 67
            I+RPVLA V SL ILL G      L +R+YP ++  +I V T Y GANA+ I+  IT+PL
Sbjct: 9    IRRPVLAIVFSLTILLFGIIGMTFLGVREYPSVDPPIINVRTTYVGANADVIEAQITEPL 68

Query: 68   QQSLASAEGIDYMTSVSRQNFSIISIYARIGADSDRLFTELLAKANEVRNKLPQDSEDPV 127
            ++S+    GI  +TS S    S I++   +GAD +    ++  K +  +  LP D+E PV
Sbjct: 69   EESINGISGIKSLTSTSNDGTSNITVEFDVGADMEAAANDVRDKVSRAQRNLPPDAEPPV 128

Query: 128  LSKEAADASALMYVSFYSKEMSNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFAMRLW 187
            +SK  AD+  +++++  S++ S  Q++D    + + +L T+PG++E  I G + +AMRL 
Sbjct: 129  VSKADADSEPIVFLNVKSEQKSLLQLSDIADNIFKERLQTIPGVSEVRIWGEKEYAMRLR 188

Query: 188  LDPVKLAGFGLSATDVTNAVRRYNFLSAAGEVKGEYVVTSVNASTELKSAEAFAALPLKT 247
            +DP+++A +G++  DV   V+  N    +G ++G  +  SV   + L + + F  L +K 
Sbjct: 189  MDPIRMASYGVTPLDVLTKVQSENVELPSGRIEGSTIELSVRTKSRLSTPDEFNNLIIKE 248

Query: 248  SGDSRVLLGDVARVEMGAENYDTVSSFDGTPSVYIGIKATPAANPLDVIKEVRRIMPELE 307
            S ++ V   DV   E+   N  TV   DG P V + +   P +N +D++ E  R +  ++
Sbjct: 249  SENNIVRFQDVGNAELAPLNERTVLKRDGVPMVGVVLVPLPGSNSIDIVDEFYRRLEFIK 308

Query: 308  SQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPL 367
              LP  + + I +D+T +I+ SI EV +T+  A L+V+ ++FLFL   R+  IPV+TIP+
Sbjct: 309  KDLPEDIELGIGFDSTEYIRNSISEVQETILLAFLLVVAIIFLFLRDWRTTFIPVITIPI 368

Query: 368  SMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHMEEGKSPFDAALEGA 427
            S++GV F M  M +S+N+LTLL +VL+IGLVVDDAIVV+ENI+  +E+G+ P  AA +GA
Sbjct: 369  SLVGVFFIMYTMDFSINVLTLLGIVLSIGLVVDDAIVVLENIYSKIEKGEQPEAAAEKGA 428

Query: 428  REIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGIVALTLSPMMCAL 487
             EI   V++ TI LAAV+ P+ FLTG TG LF+EF + +AG+VIIS  VALT++PM+ + 
Sbjct: 429  EEIFFAVIATTIALAAVFLPVIFLTGTTGRLFREFGVVVAGSVIISSFVALTMTPMLSSK 488

Query: 488  LLRREQNPSGLAHRLDQLFERLKGRYQRLLHATLDSRPVVLVFAVIILCLIPVLLKFTQN 547
            LL++ +  +   +  +  F  L  +Y+  L   +  R V  +  + +   I +L     +
Sbjct: 489  LLKKREKHNWFYNVTEPGFLWLNKKYEAALVWFMQFRWVSFIIILAMGGGIYLLFNTIPS 548

Query: 548  ELAPNEDQGVIFMMSSSPQPANLDYLNAYTDQ-----FTPLFKAFPEYYSSFQINGFNGV 602
            ELAP ED+G + +  S P+ A  +Y++   D+      T +     + + S    GF   
Sbjct: 549  ELAPTEDRGEMRINMSGPEGATFEYMDRVIDELLYEMMTTIPSDVWDSFISVTSPGFGTA 608

Query: 603  QTGIGGFLLKPWNERERT--QMELLPLVQAKLEEISGLQIFGFNLPSLPGTGEGLPFQFV 660
             T  G   ++  +  +RT  Q  +   V   L + + ++ F     S+     G+P Q+V
Sbjct: 609  STNSGFIRVRLVDASQRTVSQQAVFEDVAEILRKKTDVKAFASQPQSIGDRRGGMPIQYV 668

Query: 661  INTAGDYPALLDVAQRIKTRAQESGKFAFLDIDLAFDKPEVVVDIDRAKAAQMGVSMDTL 720
            +  A +   L +V         +S  F F DI+L F KPE+ V+IDR KA  +GVS+  +
Sbjct: 669  LQ-AQNLEKLKEVIPAFMDEVTQSPIFQFSDINLKFTKPEIEVEIDREKARNIGVSVQEI 727

Query: 721  GGTLATLLGEAEINRFTLEGRSYKVIAQVERPYRDNPGWLNNYYVKNDQGQLLPLSTLIT 780
              TL         + F + G+ Y+V+ ++++  R+ P  L   YV+ + GQL+ L  L+ 
Sbjct: 728  ARTLQLSYSGQRFDYFIMNGKQYQVVGEMQKEDRNEPINLRMLYVRAENGQLVQLDNLVN 787

Query: 781  LTDRARPRQLNQFQQLNAAIIQG--VPMVSLGEALKTVQDIAREEAPEGFAFDYAGAARQ 838
            +T+++ P QL +F +  +A +     P  ++G+ L  +  IA E   E F  D AG +++
Sbjct: 788  ITEKSTPPQLYRFNRFVSATVSAGLAPKYTIGDGLDEMDRIAAEVLDESFTTDVAGVSKE 847

Query: 839  YVQEGSALWVTFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALLPLFLGVSSMNI 898
            + +  ++L   F  AL +I+LVL+AQFESF DPL I++TVPL++ GALL L+LG  ++NI
Sbjct: 848  FRESSNSLIFAFLFALILIYLVLSAQFESFTDPLTIMITVPLALFGALLSLWLGGYTLNI 907

Query: 899  YTQVGLVTLIGLISKHGILIVEFANQLRDERGLSVREAIEEAAAIRLRPVLMTTAAMVFG 958
            ++Q+G++ LIGL++K+GILIVEFANQ R   GL V EAI  AA  R RP+LMT+ + + G
Sbjct: 908  FSQIGIIMLIGLVTKNGILIVEFANQ-RKAHGLEVDEAIIGAAVARFRPILMTSLSTILG 966

Query: 959  MVPLILASGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCIYTLLAHKASAKA 1010
            ++P+ LA GAGA SR  +G+ +  G+ + T+ TLFV+P +YT L  K+S  A
Sbjct: 967  ILPIALALGAGAESRSPMGVAVIGGLVLSTILTLFVIPGVYTYLTSKSSRLA 1018