Pairwise Alignments

Query, 227 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

Subject, 226 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  154 bits (390), Expect = 1e-42
 Identities = 93/223 (41%), Positives = 130/223 (58%), Gaps = 3/223 (1%)

Query: 2   RILLVEDNRDILANLADYLGMKGYTVDCAQDGLSGLHLAATEHYDLIVLDIMLPGIDGYT 61
           R+L +ED+      +   L   G  VD A +G  GL  A    YDLI LD MLP +DG T
Sbjct: 3   RVLTIEDDAVTGQEIVAELTSHGLEVDWADNGREGLAKAIAGGYDLITLDRMLPEVDGLT 62

Query: 62  LCKRLREDARRDTPVIMLTARDQLDDRLQGFRSGADDYLLKPFALSELAARIEAVLRRAQ 121
           +   LR + +  TP++M++A   +D+R++G R+G DDYL KPFA  E+AAR+E +LRR  
Sbjct: 63  IVTTLR-NLKIATPILMISALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRNS 121

Query: 122 GGGRRT-LQVADLSYDLDTLEVTRQGRLLKLNPVGLKLLAVLMQKSPHVLRREVLEEALW 180
               +T LQVADL  DL + E  R    L L P   KLL  LM+ S  V+ R ++ E +W
Sbjct: 122 VPTTQTRLQVADLQLDLISHEARRGDNTLNLLPTEYKLLEYLMRHSGQVITRMMIFEEVW 181

Query: 181 GDDC-PDSDSLRSHVHQLRQVIDKPFEKPLLHTVHGVGYRLAE 222
           G    P ++ +  H+ +LR+ ID P + PL+ TV G GY +AE
Sbjct: 182 GYHFDPGTNLIDVHIGRLRKKIDSPGQSPLIRTVRGSGYAIAE 224