Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

 Score =  443 bits (1139), Expect = e-129
 Identities = 231/524 (44%), Positives = 325/524 (62%), Gaps = 10/524 (1%)

Query: 19  APSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGTAVIPGLATK 78
           A  A  A+ L  CSE SP GFD  QY + T  +A+A+ + NRL +F+     V+P LAT 
Sbjct: 15  AAGAAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFDAAQGKVVPSLATS 74

Query: 79  WEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFRKAYPTEFP 138
           W VS DG  Y F LR+ VKFH+T YFKPSR  NADDVLF+F RML   + + K  P  +P
Sbjct: 75  WTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYPAHAWHKTAPGGYP 134

Query: 139 YFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQLLKNGKAA 198
           +   + +   I  +E    +TV+FTL+  DA F+  L+M FASI SAEYAD+LLK G   
Sbjct: 135 HAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSAEYADKLLKAGTPE 194

Query: 199 DINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASVRMQKLKKN 258
            +N +PIGTGPFVF ++QKDA +R++ N DY+  +   +D LIFAITTDA+VR+QKLK+ 
Sbjct: 195 KLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPA-VDPLIFAITTDANVRLQKLKRG 253

Query: 259 ECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANPMAQLKVRQA 318
           ECQV L P+P DI     D NL++     F   ++A N        ++  P+ + +VRQA
Sbjct: 254 ECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAIN--------SQHPPLDKPEVRQA 305

Query: 319 LDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQLLKEAGIKEGT 378
           +++A D++  +++V++ +   A    PP  WSY   +     D +KAK LL +AG+ EG 
Sbjct: 306 INLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGLAEGF 365

Query: 379 EITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRSKGGEQGAMLIG 438
             T+W  P     NPN  L A+MLQ+D AKIGIKA+I   EWGE I+R+K GE   + +G
Sbjct: 366 STTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHDLLFMG 425

Query: 439 WSGDNGDPDNWLGTLYGCDAVD-GNNFSKWCYKPYDDLIKQAKATSDQAKRTELYQKAQH 497
           W+GDNGDPDN+L   + C AV+ G NF+++C    D LI   + T+DQ+ R+ LYQ+AQ 
Sbjct: 426 WAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQQAQT 485

Query: 498 ILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSVDK 541
           ++++Q    P+AH T    +   V+ +++SPF    F  V+V K
Sbjct: 486 LIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTVTK 529