Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  612 bits (1578), Expect = e-179
 Identities = 297/541 (54%), Positives = 394/541 (72%), Gaps = 11/541 (2%)

Query: 1   MLKHAVIPFLLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNR 60
           ++K  V+ F LG   LS A + V A  LV+CSEGSP GF+P  +T+GT FDAS+  ++NR
Sbjct: 5   LMKSRVLKFSLGLLALSVA-AGVQAKTLVYCSEGSPEGFNPQLFTSGTTFDASSIPIYNR 63

Query: 61  LTQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFN 120
           L +F+ G T + PGLA KW++S DGKTYTFHLR+ VK+     FKPSR FNADDVLF+F 
Sbjct: 64  LVEFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKDFKPSRTFNADDVLFSFQ 123

Query: 121 RMLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFA 180
           R +D ++PF K     + YF  MGM   I K+EK+D++TV+F L   +A F+ +LAM FA
Sbjct: 124 RQIDANHPFHKVSGGSYEYFEGMGMPDLIGKIEKVDDYTVRFQLTRAEAPFLADLAMDFA 183

Query: 181 SIQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNL 240
           SI SAEY D++LK G    I+  PIGTGPF   +YQKD++I +K    +W  +   ID L
Sbjct: 184 SIMSAEYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTKP-GIDRL 242

Query: 241 IFAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDK 300
           +F+IT DASVR  KL+K+ECQV  +P PAD+  +K DKN+++ Q+ G N+GY+++NV   
Sbjct: 243 VFSITPDASVRYAKLQKDECQVMPYPNPADLTNMKQDKNIELLQKPGLNVGYLSFNV--- 299

Query: 301 IKGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAF 360
                E  P+  +K+RQAL  AV+K+ IIE+VYQGAGQ A N +PPT W Y+D +KD A+
Sbjct: 300 -----EKKPLDNVKIRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTMWGYNDDVKDYAY 354

Query: 361 DPEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEW 420
           DP KAK LLKEAG++ G EI LWAMPVQRPYNPNA+ MAEM+Q+DWAK+G+KAKIV+YEW
Sbjct: 355 DPAKAKALLKEAGMENGFEIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVKAKIVTYEW 414

Query: 421 GEYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAV-DGNNFSKWCYKPYDDLIKQA 479
           GEY+KR+K GE   +L+GW+GDNGDPDN+L TL+ CDA   G+N+SKWCYKP++DLI+ A
Sbjct: 415 GEYLKRAKSGEHQTVLMGWTGDNGDPDNFLATLFSCDAAKKGSNYSKWCYKPFEDLIQPA 474

Query: 480 KATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSV 539
           +A SDQAKR ELY++AQ ++ +Q P   +AHSTVY+P+   VK + I P  ++SF  VSV
Sbjct: 475 RAVSDQAKRIELYKQAQVVMHDQAPALIVAHSTVYEPIRKNVKGYVIEPRGVHSFNHVSV 534

Query: 540 D 540
           D
Sbjct: 535 D 535