Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 570 a.a., peptide ABC transporter substrate-binding protein SapA from Dickeya dianthicola ME23

 Score =  322 bits (824), Expect = 3e-92
 Identities = 167/520 (32%), Positives = 286/520 (55%), Gaps = 11/520 (2%)

Query: 22  AVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGTAVIPGLATKWEV 81
           A+  S  V+C     + F+P    +G   D  A  +++RL   +     ++P LA  W+V
Sbjct: 32  AIRHSGFVYCVNDVLSTFNPQMARSGLMVDTLAAQLYDRLLGVDPYTYRLMPELAQHWDV 91

Query: 82  SDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFRKAYPTEFPYFT 141
           +D+G TY F LR  V F  T +F PSR  NADDVLF+F RML+K +PF      ++PYF 
Sbjct: 92  TDNGSTYRFTLRRDVPFQRTAWFTPSRTMNADDVLFSFQRMLNKKHPFHDVNGGDYPYFD 151

Query: 142 DMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQLLKNGKAADIN 201
            + +  N+  + KL +++++  L+  DA+F+ +LA  +A + SAEYA QL +  +   ++
Sbjct: 152 SLQLADNVQSIRKLGDYSIEIRLHSPDASFLWHLATHYAPVLSAEYAQQLTRQDRRELLD 211

Query: 202 QKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASVRMQKLKKNECQ 261
           ++P+GTGP+   +Y+    +R K + DYW+ +  +++ ++  + +  + R+ KL   EC 
Sbjct: 212 RQPVGTGPYRLDEYRYGQYVRLKRHDDYWRGQP-RMEQVLVDLGSGGTGRLSKLLTGECD 270

Query: 262 VTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANPMAQLKVRQALDM 321
           V  +P  + +  L+ D  L++  + G N+ Y+A+NV           P+   +VR A+ +
Sbjct: 271 VLAYPAASQLTILRNDPRLRLSLRPGMNVAYLAFNV--------RKPPLDDSRVRHAIAL 322

Query: 322 AVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDPEKAKQLLKEAGIKEGTEIT 381
           A++  ++++S+Y G  + A + +P   W+YD+  +   ++PEKA+Q LKE GI    ++ 
Sbjct: 323 AINNDRLMQSIYYGTAETAASILPRASWAYDNEAQVTEYNPEKARQQLKELGI-TNLQLQ 381

Query: 382 LWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKRSKGGEQGAMLIGWSG 441
           LW     + YNP+    AE++Q+D A++GI+  I+  E      R         L GW+ 
Sbjct: 382 LWVPSASQSYNPSPVKTAELIQADLAQVGIRVTIMPVEGRFQEARLMEMNHDLTLAGWAT 441

Query: 442 DNGDPDNWLGTLYGCDAV-DGNNFSKWCYKPYDDLIKQAKATSDQAKRTELYQKAQHILK 500
           D+ DPD+    L  C A+    N++ WC   +D +++ A ++   ++R E Y+ A HIL 
Sbjct: 442 DSNDPDSVFRPLLSCAAIRSQTNYAHWCDPGFDQVLQDALSSQQLSRRMEYYRVAHHILA 501

Query: 501 EQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSVD 540
           EQ+P+ P+A S   Q     +K   +SPF   SF GV  D
Sbjct: 502 EQLPVLPLASSLRMQAYRYDMKGLVLSPFGNASFAGVYRD 541