Pairwise Alignments

Query, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  544 bits (1402), Expect = e-159
 Identities = 264/539 (48%), Positives = 367/539 (68%), Gaps = 11/539 (2%)

Query: 2   LKHAVIPFLLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRL 61
           +K+A+    L A  L+ A +A  A+ LV+CSEGSP  F+P  YT+GT  DASA  ++NRL
Sbjct: 1   MKNAITRVALAALTLAAAQAA-CANTLVYCSEGSPENFNPQLYTSGTSVDASAVPIYNRL 59

Query: 62  TQFERGGTAVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNR 121
             F+ G T ++P LA +W++S DG  YTFHLR+GVKFH    F PSR FNADDV+F+F R
Sbjct: 60  VDFKVGTTELVPSLAERWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVIFSFQR 119

Query: 122 MLDKDNPFRKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFAS 181
             D ++P+ K     +  F  +     I  ++++D++ V+FTL+  +A F+ +LA  FAS
Sbjct: 120 QRDLNHPYHKVSGGTYANFESLSFRSLITAIDRVDDYRVRFTLSHAEAPFLADLAWYFAS 179

Query: 182 IQSAEYADQLLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLI 241
           + SAEYADQ+LK G    ++ +PIGTGPF  ++YQKD++I ++   DYWQ +  K+D L+
Sbjct: 180 VLSAEYADQMLKAGAPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPDYWQGK-AKLDRLV 238

Query: 242 FAITTDASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKI 301
           F+IT DASVR  KL+KNECQV  FP PA++  +K++K++ + Q+AG N+G++A+N     
Sbjct: 239 FSITPDASVRYAKLRKNECQVMPFPNPAELADIKSNKDITLMQKAGLNIGFLAFN----- 293

Query: 302 KGSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFD 361
                  P+  LKVRQAL MA++K  IIE+V+QG G  A N +PP  WS    +KD  +D
Sbjct: 294 ---TRKAPLDNLKVRQALTMAINKPAIIEAVFQGTGSAAKNLLPPGVWSAAADLKDYEYD 350

Query: 362 PEKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWG 421
           P KA+ LLK+AG+ EGT I LWAMPVQRPYNPNA+ MAEM+Q+DWAK+G+ A IVSYEWG
Sbjct: 351 PGKARALLKDAGLAEGTTIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVNANIVSYEWG 410

Query: 422 EYIKRSKGGEQGAMLIGWSGDNGDPDNWLGTLYGCDAVD-GNNFSKWCYKPYDDLIKQAK 480
           EY+KR + GE  A L+GW+   GDPDN+ G L+ C + + G+N SKWCY P+D LI  A+
Sbjct: 411 EYLKRVRSGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSSKWCYPPFDKLITDAR 470

Query: 481 ATSDQAKRTELYQKAQHILKEQVPITPIAHSTVYQPMSAKVKDFKISPFALNSFYGVSV 539
           A  D  KR ELY++AQ ++ EQ P   IAHST+++P+   V  + I PF  + FY V +
Sbjct: 471 AEQDHQKRVELYRQAQFMMHEQAPAVMIAHSTLFEPVRNTVTGYDIDPFGKHIFYQVDI 529