Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  693 bits (1789), Expect = 0.0
 Identities = 330/532 (62%), Positives = 406/532 (76%), Gaps = 2/532 (0%)

Query: 1   MRHVTCLSALLALGLVSQSPVL-LANNLVFCSEGSPAGFDTAQYTSATDNDA-AEPIYNR 58
           M  +     LLA GL++  P+   A+ LV+CSE SPAGFD +QYTS TD DA AE ++NR
Sbjct: 1   MERIALKPLLLAAGLLACMPLAQAASTLVYCSEASPAGFDPSQYTSGTDFDASAETVFNR 60

Query: 59  LVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFN 118
           L +F+RGGT V P LAT W++S +GL YTFHLR+GV+FH+   FSP+R FNADDVLFTFN
Sbjct: 61  LTQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFN 120

Query: 119 RMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFA 178
           R+LD    FRQAYP+E PYF  MGL+  I  V+K D  TV F LN VDA+F+QNLAMSFA
Sbjct: 121 RLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFA 180

Query: 179 SILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNL 238
           S+ SAEYA QLL  G+  +INQ+P+GTGPFVF+RYQKDSQIRY  NK YW   +VK+DNL
Sbjct: 181 SVQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNL 240

Query: 239 VFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHP 298
           VF+I  D + R+QKL+  ECQV+ +PRPAD+  +K D  L VLQQ GFNLG++AYN  HP
Sbjct: 241 VFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHP 300

Query: 299 PFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQL 358
           P D+L+VRQA+DMA++K AI++AVYQ AGQ A NA+PP QWSYD +IKDAPY P KA+ L
Sbjct: 301 PLDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKAL 360

Query: 359 IQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMK 418
           +++AGV PGT + LWAM VQR  NPNA++ A+M+Q DW K+G K  IVSYEWGEY+KR K
Sbjct: 361 LKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSYEWGEYIKRAK 420

Query: 419 NGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQR 478
           NGEHD  + GWTGDNGDPDNWLG LYSC A+  +NY++WC+P YD LV+QAK   DR QR
Sbjct: 421 NGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQAKVSNDREQR 480

Query: 479 TALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSVD 530
              YQQAQ+ LK+QVPITP+A+S V QPL  +V  FK+SPFG   F GVS+D
Sbjct: 481 IKWYQQAQKILKEQVPITPIANSTVFQPLRKEVKDFKISPFGLTPFYGVSLD 532