Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  719 bits (1857), Expect = 0.0
 Identities = 347/530 (65%), Positives = 413/530 (77%), Gaps = 10/530 (1%)

Query: 10  LLALGLVSQSPVL-LANNLVFCSEGSPAGFDTAQYTSATDNDA-AEPIYNRLVEFERGGT 67
           +++ GL++ +P    A NLVFCSEGSPAGFD  QYT+ TD DA AE ++NRL +FERGGT
Sbjct: 10  IVSAGLMAAAPFAQAATNLVFCSEGSPAGFDPGQYTTGTDFDASAETMFNRLTQFERGGT 69

Query: 68  AVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDKGHRF 127
           AV P LAT W+VS +GL YTFHLR+GV+FH+   F P+RTFNADDVLFTFNRM++K   F
Sbjct: 70  AVIPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFNRMINKDDPF 129

Query: 128 RQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASILSAEYAE 187
           R+AYPTEFPYF  MG+D NI  +EK D  TV FTL TVDAAFIQNLAMSFASI SAEYA 
Sbjct: 130 RKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFASIQSAEYAA 189

Query: 188 QLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSINTDPS 247
           QLL  G+P+DINQ+PIGTGPFVF+ YQKDS IRY GNKDYW   +VKIDNL+F+I TDPS
Sbjct: 190 QLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNLIFAITTDPS 249

Query: 248 VRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNT--------QHPP 299
           VRIQKL++NECQ+TL PRPADL AL  D  L++  Q GFNLGYIAYN         Q  P
Sbjct: 250 VRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAYNVMDKVKGSDQPNP 309

Query: 300 FDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLI 359
              L VRQA+DM+VNK+ I+ +VYQ AGQ AVNAMPPTQWSYD +IKDA Y PEKA+ L+
Sbjct: 310 LADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSYDTTIKDAKYDPEKAKSLL 369

Query: 360 QQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKN 419
           ++AG+K GTEI LWAMPVQRPYNPNAKLMAEMLQ DW K+G  V+I SYEWGEY+KR K 
Sbjct: 370 KEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNVKITSYEWGEYIKRSKG 429

Query: 420 GEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQRT 479
           GE+   +IGW+GDNGDPDNWL  L+ CD++  NN+S+WCD ++D +VK+AK  +D  +RT
Sbjct: 430 GENQAMIIGWSGDNGDPDNWLNVLFGCDSLSGNNFSKWCDKKFDGIVKEAKATSDVAKRT 489

Query: 480 ALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
            LY+QAQ  LK  VP+TP+AHS V QP+   V  FK+SPFG N F GVSV
Sbjct: 490 ELYKQAQHILKDAVPMTPIAHSTVYQPMRSTVQDFKISPFGLNSFYGVSV 539