Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  859 bits (2219), Expect = 0.0
 Identities = 412/532 (77%), Positives = 465/532 (87%), Gaps = 3/532 (0%)

Query: 1   MRHVTCLSALLALGLVSQSPVLLA---NNLVFCSEGSPAGFDTAQYTSATDNDAAEPIYN 57
           MRH T LSA+ A  L++ + +  A    +LVFCSEGSPAGFDTAQYT+ATDNDAAEP+YN
Sbjct: 1   MRHTTVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYN 60

Query: 58  RLVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTF 117
           RLVEFE+G T V PALAT W++S +G+ YTFHLREGV+FHSNK F P+R FNADDVLFTF
Sbjct: 61  RLVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTF 120

Query: 118 NRMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSF 177
           NRMLD  H FR+AYPTEFPYFNGM L+KNIA+VEKTDP TVV TLNTVDAAFIQN+AMSF
Sbjct: 121 NRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSF 180

Query: 178 ASILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDN 237
           A+ILSAEYAEQLL +G+PSDINQ+PIGTGPFVFQRYQKDSQIRY  NK YW  + VK+D 
Sbjct: 181 AAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSRVKLDQ 240

Query: 238 LVFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQH 297
           L+F+INTD SVR+QKL+  ECQVTLHPRPAD+ ALKAD  L++L +PGFNLGYIAYN +H
Sbjct: 241 LIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVRH 300

Query: 298 PPFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQ 357
            PFD+LEVRQA+DMAVNK++IL AVYQ AGQ AVNAMPPTQWSYDDSIKDA Y PEKA++
Sbjct: 301 KPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAKE 360

Query: 358 LIQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRM 417
           L++ AGVK GTEITLWAMPVQRPYNPNAKLMAEMLQ+DW+K+G KV+IVSYEWGEY+KR 
Sbjct: 361 LLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRT 420

Query: 418 KNGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGSNNYSQWCDPQYDSLVKQAKQVTDRTQ 477
           KNGEHD++LIGWTGDNGDPDNWLGTLYSCDAIG NNYS WCDP YD L+KQAK VTDR Q
Sbjct: 421 KNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAKVVTDREQ 480

Query: 478 RTALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
           RT LY+QAQQ LKQQVPITPVAHS V+QPLS KV  FKVSPFGRN FSGVS+
Sbjct: 481 RTVLYKQAQQLLKQQVPITPVAHSTVNQPLSAKVEGFKVSPFGRNVFSGVSI 532