Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  451 bits (1161), Expect = e-131
 Identities = 224/508 (44%), Positives = 322/508 (63%), Gaps = 3/508 (0%)

Query: 24  ANNLVFCSEGSPAGFDTAQYTS-ATDNDAAEPIYNRLVEFERGGTAVHPALATHWEVSDN 82
           A+NL  C+E SP GFD  QY S  T N +A+ + NRLV+++     + P+LA  WEVS +
Sbjct: 22  ASNLSVCTEASPEGFDVVQYNSLTTTNASADVLMNRLVDYDAASGKLVPSLADSWEVSPD 81

Query: 83  GLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDKGHRFRQAYPTEFPYFNGMG 142
           GL YTF L   V+FH  + F+PSRT  A+DV F+F RMLD  + + +   + FP+   + 
Sbjct: 82  GLTYTFKLHPDVKFHRTEYFTPSRTLTAEDVRFSFERMLDPANPWHKIAQSGFPHAQSLQ 141

Query: 143 LDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASILSAEYAEQLLASGRPSDINQQP 202
           L   + +++  DPLTV FTL+  D+ F+  L+M FASI  AEYAE+LL +G P  +N QP
Sbjct: 142 LPTLVKKIDALDPLTVRFTLDHADSTFLAALSMGFASIYPAEYAEKLLKAGTPEKLNSQP 201

Query: 203 IGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSINTDPSVRIQKLRRNECQVTL 262
           IGTGPF+F R+QKD+ +RYK N +Y+A     +DNL+F+I  D +VR+QKL R+ECQ+ L
Sbjct: 202 IGTGPFIFSRFQKDAVVRYKANPNYFAGKP-PVDNLIFAITPDANVRLQKLHRDECQIAL 260

Query: 263 HPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPFDRLEVRQAMDMAVNKEAILQAV 322
            P+P D+   + D  L+V +   F   ++A N+QHPP D+ EVRQA+++A +K + L+AV
Sbjct: 261 SPKPLDVGEAEKDPALKVEKTAAFMTAFLAINSQHPPLDKPEVRQAINLAFDKGSYLKAV 320

Query: 323 YQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKARQLIQQAGVKPGTEITLWAMPVQRPYN 382
           ++   + A    PP  WSY   +   P    KA+ L+ +AG+K G + T+W  P     N
Sbjct: 321 FEGTAEAANGPYPPNTWSYAKDLPGYPQDLAKAKALLDRAGLKDGFKTTIWTRPTGSLLN 380

Query: 383 PNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKNGEHDIALIGWTGDNGDPDNWLGT 442
           PN  L A++LQAD +K+G +  I   EWGE ++R K GEHD+  +GW GDNGDPDN+L  
Sbjct: 381 PNPNLGAQLLQADLAKVGIQAEIRVIEWGELIRRAKAGEHDLLFMGWAGDNGDPDNFLTP 440

Query: 443 LYSCDAIGS-NNYSQWCDPQYDSLVKQAKQVTDRTQRTALYQQAQQRLKQQVPITPVAHS 501
            +SC A+ S  N++++CDP  D L+   K  +++  R+ LYQQAQ +++QQ    P+AH 
Sbjct: 441 QFSCAAVKSGTNFARYCDPALDKLISAGKTTSEQGVRSKLYQQAQAQIQQQALWLPLAHP 500

Query: 502 IVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
                    V  ++VSPFGR DFS VSV
Sbjct: 501 TAFALARKNVEGYQVSPFGRQDFSKVSV 528