Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 544 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  451 bits (1161), Expect = e-131
 Identities = 234/524 (44%), Positives = 331/524 (63%), Gaps = 5/524 (0%)

Query: 9   ALLALGLVSQSPVLLANNLVFCSEGSPAGFDTAQYTSATDNDA-AEPIYNRLVEFERGGT 67
           AL+AL L+  +  L A  LV C+E SP GFD  QYT+A   DA AE ++NRLV+F+ G T
Sbjct: 22  ALVAL-LLGGATQLAAKPLVVCTEASPEGFDIVQYTTAVTADASAETVFNRLVDFKPGTT 80

Query: 68  AVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLFTFNRMLDKGHRF 127
            + PALA  W++S +GL YTFHLR+GV+FH+   F P+R  NADDVL++ NR LD  H +
Sbjct: 81  EIQPALAERWDISADGLTYTFHLRQGVKFHTTDYFKPTRDLNADDVLWSLNRQLDPNHPW 140

Query: 128 RQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAMSFASILSAEYAE 187
                  +PYF  MG  + +  V K D  TVV TL+  +A F++++AM F SI SAEY +
Sbjct: 141 HDKTSVGYPYFESMGFKELLKSVSKADEHTVVITLSRPEAPFLRDMAMGFTSIYSAEYGD 200

Query: 188 QLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKIDNLVFSINTDPS 247
           QLL SG+ +++N +PIGTGPF+FQRY KD+Q+R+K N DY+   +   D LVF+I  D +
Sbjct: 201 QLLKSGKTAELNSKPIGTGPFIFQRYNKDAQVRFKPNPDYF-RGKPPADALVFAIAIDSN 259

Query: 248 VRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNTQHPPFDRLEVRQ 307
           VR+QKLR NECQV L+P+P D+P++K D  L+V +      GYIA NTQH   + + VR+
Sbjct: 260 VRLQKLRANECQVALYPKPDDVPSIKQDPKLKVEEIEALVTGYIAMNTQHKYLNDVRVRK 319

Query: 308 AMDMAVNKEAILQAVYQDAGQR-AVNAMPPTQWSYDDSIKDAPYAPEKARQLIQQAGVKP 366
           A++MA +++  +  ++        VN  PPT   Y+   ++ P   +KAR L+ QAGV  
Sbjct: 320 AINMAFDRQTHVDQLFGKGNALVGVNPYPPTMIGYNTHNQNPPRDLDKARALLSQAGVPE 379

Query: 367 GTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLKRMKNGEHDIAL 426
           GT ITL+      P NPN +L AEMLQAD  ++G K+ I   EW E L+R KNGE D+  
Sbjct: 380 GTVITLFTRNGGGPTNPNPRLSAEMLQADLKQIGLKLDIRVMEWAEMLRRAKNGEADLVS 439

Query: 427 IGWTGDNGDPDNWLGTLYSCDAIGS-NNYSQWCDPQYDSLVKQAKQVTDRTQRTALYQQA 485
            GW GDNGDPDN+L  L SCDA+ S  NY++WC+P++  L+ +A++V D  +R  LY +A
Sbjct: 440 TGWAGDNGDPDNFLSPLLSCDAVKSGENYARWCNPKFQELISRAREVIDNDERARLYNEA 499

Query: 486 QQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
            +    + P   +AH  +   +   V  + ++P   N+F+   V
Sbjct: 500 LKVYDDEQPWISMAHPKMFTAMRDNVEGYVINPLTNNNFATTKV 543