Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 536 a.a., ABC transporter substrate-binding protein from Erwinia tracheiphila SCR3

 Score =  548 bits (1411), Expect = e-160
 Identities = 268/535 (50%), Positives = 360/535 (67%), Gaps = 7/535 (1%)

Query: 1   MRHVTCLSALLALGL----VSQSPVLLANNLVFCSEGSPAGFDTAQYTSATDNDAAE-PI 55
           MR     + +L +GL    ++ S  + A  LV+CSEGSP GF+   +TS T  DA+  PI
Sbjct: 1   MRISVAKTGMLKVGLSLIALTVSAGVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPI 60

Query: 56  YNRLVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNADDVLF 115
           YNRLVEF+ G T + P LA  W++S +G  YTFHLREGV++ + K F P R FNADDV+F
Sbjct: 61  YNRLVEFKTGTTELQPGLAEKWDISADGKTYTFHLREGVKWQTTKDFKPGRDFNADDVVF 120

Query: 116 TFNRMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQNLAM 175
           +F R LDK +++       + YF GM + K I +VEK D  TV F L   +A F+ +L M
Sbjct: 121 SFERQLDKNNKYHSLSGGSYEYFEGMDMPKIIEKVEKVDDHTVRFVLTRSEAPFLADLGM 180

Query: 176 SFASILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAANEVKI 235
            FASILSAEYA+ +L +G P  ++  P+GTGPF   +YQKDS+I YK    YW  N+ KI
Sbjct: 181 DFASILSAEYADNMLKAGTPEKLDLNPVGTGPFQLMQYQKDSRILYKAFDQYWG-NKPKI 239

Query: 236 DNLVFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYIAYNT 295
           D LVFS+  D SVR  KL++ ECQV   P PADL  +K D  + ++Q PG N+GY+A+NT
Sbjct: 240 DRLVFSVTPDASVRYAKLQKGECQVIPFPNPADLARMKEDKNINLMQIPGLNVGYLAFNT 299

Query: 296 QHPPFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYAPEKA 355
           +  P D ++VRQA+ MAVNK+AI+ AVYQ AGQ A N +PPT W Y+D+++D PY  EKA
Sbjct: 300 EKKPLDNVKVRQALIMAVNKKAIIDAVYQGAGQTAKNLIPPTMWGYNDAVQDYPYDTEKA 359

Query: 356 RQLIQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWGEYLK 415
           + L+++AG+  G  I LWAMPVQRPYNPNA+ MAEM+Q DW+K+G K +IV+YEWGEYLK
Sbjct: 360 KALLKEAGLADGFTIDLWAMPVQRPYNPNARRMAEMVQNDWAKIGVKAKIVTYEWGEYLK 419

Query: 416 RMKNGEHDIALIGWTGDNGDPDNWLGTLYSCDAI-GSNNYSQWCDPQYDSLVKQAKQVTD 474
           R K GEH   ++GWTGDNGDPDN+  TL+SC A    +NYS+WC   ++ L++ A+   D
Sbjct: 420 RAKAGEHQTVMMGWTGDNGDPDNFFATLFSCAAAKEGSNYSRWCYKPFEELIQPARAEAD 479

Query: 475 RTQRTALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSV 529
             +R   Y+QAQ  + +Q P   +AHS V +P+S KVS + V P G++ F  V +
Sbjct: 480 HNKRVEYYKQAQVMMHEQAPALIIAHSTVYEPVSKKVSGYVVDPLGKHHFDNVDI 534