Pairwise Alignments

Query, 530 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

Subject, 570 a.a., peptide ABC transporter substrate-binding protein SapA from Dickeya dianthicola ME23

 Score =  337 bits (865), Expect = 5e-97
 Identities = 181/540 (33%), Positives = 295/540 (54%), Gaps = 13/540 (2%)

Query: 2   RHVTCLS-ALLALGLVSQSP--------VLLANNLVFCSEGSPAGFDTAQYTSATDNDA- 51
           +H   L+ A LAL +++Q+P         +  +  V+C     + F+     S    D  
Sbjct: 4   KHTLALALAWLALPVLAQTPPTAPTPAQAIRHSGFVYCVNDVLSTFNPQMARSGLMVDTL 63

Query: 52  AEPIYNRLVEFERGGTAVHPALATHWEVSDNGLRYTFHLREGVRFHSNKAFSPSRTFNAD 111
           A  +Y+RL+  +     + P LA HW+V+DNG  Y F LR  V F     F+PSRT NAD
Sbjct: 64  AAQLYDRLLGVDPYTYRLMPELAQHWDVTDNGSTYRFTLRRDVPFQRTAWFTPSRTMNAD 123

Query: 112 DVLFTFNRMLDKGHRFRQAYPTEFPYFNGMGLDKNIARVEKTDPLTVVFTLNTVDAAFIQ 171
           DVLF+F RML+K H F      ++PYF+ + L  N+  + K    ++   L++ DA+F+ 
Sbjct: 124 DVLFSFQRMLNKKHPFHDVNGGDYPYFDSLQLADNVQSIRKLGDYSIEIRLHSPDASFLW 183

Query: 172 NLAMSFASILSAEYAEQLLASGRPSDINQQPIGTGPFVFQRYQKDSQIRYKGNKDYWAAN 231
           +LA  +A +LSAEYA+QL    R   +++QP+GTGP+    Y+    +R K + DYW   
Sbjct: 184 HLATHYAPVLSAEYAQQLTRQDRRELLDRQPVGTGPYRLDEYRYGQYVRLKRHDDYW-RG 242

Query: 232 EVKIDNLVFSINTDPSVRIQKLRRNECQVTLHPRPADLPALKADSTLQVLQQPGFNLGYI 291
           + +++ ++  + +  + R+ KL   EC V  +P  + L  L+ D  L++  +PG N+ Y+
Sbjct: 243 QPRMEQVLVDLGSGGTGRLSKLLTGECDVLAYPAASQLTILRNDPRLRLSLRPGMNVAYL 302

Query: 292 AYNTQHPPFDRLEVRQAMDMAVNKEAILQAVYQDAGQRAVNAMPPTQWSYDDSIKDAPYA 351
           A+N + PP D   VR A+ +A+N + ++Q++Y    + A + +P   W+YD+  +   Y 
Sbjct: 303 AFNVRKPPLDDSRVRHAIALAINNDRLMQSIYYGTAETAASILPRASWAYDNEAQVTEYN 362

Query: 352 PEKARQLIQQAGVKPGTEITLWAMPVQRPYNPNAKLMAEMLQADWSKLGFKVRIVSYEWG 411
           PEKARQ +++ G+    ++ LW     + YNP+    AE++QAD +++G +V I+  E  
Sbjct: 363 PEKARQQLKELGI-TNLQLQLWVPSASQSYNPSPVKTAELIQADLAQVGIRVTIMPVEGR 421

Query: 412 EYLKRMKNGEHDIALIGWTGDNGDPDNWLGTLYSCDAIGS-NNYSQWCDPQYDSLVKQAK 470
               R+    HD+ L GW  D+ DPD+    L SC AI S  NY+ WCDP +D +++ A 
Sbjct: 422 FQEARLMEMNHDLTLAGWATDSNDPDSVFRPLLSCAAIRSQTNYAHWCDPGFDQVLQDAL 481

Query: 471 QVTDRTQRTALYQQAQQRLKQQVPITPVAHSIVSQPLSVKVSQFKVSPFGRNDFSGVSVD 530
                ++R   Y+ A   L +Q+P+ P+A S+  Q     +    +SPFG   F+GV  D
Sbjct: 482 SSQQLSRRMEYYRVAHHILAEQLPVLPLASSLRMQAYRYDMKGLVLSPFGNASFAGVYRD 541