Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  240 bits (613), Expect = 6e-68
 Identities = 162/437 (37%), Positives = 227/437 (51%), Gaps = 31/437 (7%)

Query: 35  KSSSEQAQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQGTI 94
           +S ++QA + GFI+G S++G  RN+Y                +G R D     +W QG +
Sbjct: 23  ESVTDQADSKGFIEGSSVTGLLRNYYMNRN-----------REGGRADNI---DWTQGAM 68

Query: 95  LNYSSGFTQGTVGFAVEAAGYNAIALQQSREAIAGPNNRTLTHSDGDPVGQWSKLGLGNI 154
           LNY+SGFTQGT+GF V+A  Y  + L  +  A AG  N   T   GDP   +  +G   +
Sbjct: 69  LNYASGFTQGTIGFGVDAYAYGGLKLDATH-ADAGTGNLP-TDRHGDPEDAYGSVGAA-V 125

Query: 155 KARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGTFDRV-SPR 213
           K +VS T L  G      P+ A  G R LP +  G  L S+E   L ++ G F    S  
Sbjct: 126 KIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGM 185

Query: 214 TEQSLSKFRSEYSATGVETDRASTAGINYQPFKSLSTSLYATKVEDFWNQYYFGANHVLG 273
           T        + Y+   +  + AS  G  Y    SLS ++YA ++ED W QYY   N+V+ 
Sbjct: 186 TSNHDHDIYATYA--NIAANSASFLGGKYTFSPSLSATVYAGELEDIWRQYYTNLNYVIP 243

Query: 274 DSAVLSLSTGLNYYKTVDAGSQKMGKIDNDTYSLSLGLTH-QAHTLSASWQQVNGNEYFD 332
                SL+   N Y+T+D GS K G I+N TYSL+   +  QAHTL+ S+Q+V+G+  FD
Sbjct: 244 LVHDQSLALDGNLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFD 303

Query: 333 YLHETN--------GIFLANSL-LSDFNGPNEKSLQLSYVLNMAPYGVPGLKFNLYNARG 383
           Y+   N         ++LANS+   DFNGP E+S  + Y LNMA YGVPGL F      G
Sbjct: 304 YIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYING 363

Query: 384 WGIDGTHYRG-TAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIRATYTTHRASKAQGD 442
             I+GTH    +AY  +  D   H+E  +   Y +QSGP K+ S+R       A+  Q D
Sbjct: 364 SDINGTHTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAANADQRD 423

Query: 443 GSLDEFRVVTTIPFNIL 459
           G L+E R++   PF +L
Sbjct: 424 GDLNELRLIVDYPFTLL 440