Pairwise Alignments

Query, 459 a.a., glycine-glutamate dipeptide porin from Pseudomonas putida KT2440

Subject, 438 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  152 bits (384), Expect = 2e-41
 Identities = 139/452 (30%), Positives = 200/452 (44%), Gaps = 65/452 (14%)

Query: 37  SSEQAQASGFIDGQSLSGSTRNWYARERAARAPLWKYYKNDGTRHDTHSRENWVQGTILN 96
           +++Q Q+ GFI+   L+ + RN Y         + + YKN         +  W QG I  
Sbjct: 21  ANDQDQSKGFIEDSHLNIAARNAY---------ISRDYKNG-----KQDKAEWGQGFIGK 66

Query: 97  YSSGFTQGTVGFAVEAAGYNAIALQQSR-EAIAGP-------NNRTLTHSDGDPVGQWSK 148
             SGFTQGTVG  V+  G  AI L   +  A AG        N  T      +P      
Sbjct: 67  LESGFTQGTVGVGVDVIGQYAIRLDGGKGRAGAGGIDFFKQGNGTTNPDGSNNPGSAPHD 126

Query: 149 LGLGN--IKARVSNTTLTLGRQSVDTPMIAYIGNRALPSSFQGAFLHSAEFDNLSIDLGT 206
           L  G   +K RVSNT L  G Q    P++ Y  +R L  ++ G  + S E   L +D G 
Sbjct: 127 LAKGGAAVKFRVSNTVLKYGDQFPAVPVLQYDNSRLLSETYTGTSIVSKEIAGLQLDAGH 186

Query: 207 FDRVSPRTEQSLSKFRSEYSATGVETDRASTA---GINYQPFKSLSTSLYATKVEDFWNQ 263
           F + + +            S  G ++ R  +    G +Y+  +SLS +LYA+ ++D   +
Sbjct: 187 FTKEARK------------SMEGTDSGRLKSIDYIGGSYKFTESLSAALYASDMQDVLKK 234

Query: 264 YYFGANHVLGDSAVLSLSTGLNYYKT-VDAG----SQKMGKI-DNDTYSLSLGLTHQAHT 317
            Y   N+VL      SL+   N YKT +D      +QK     DN  +SL        H+
Sbjct: 235 QYVNVNYVLALPEKQSLTFDFNGYKTKLDRSFALENQKDADARDNKIWSLGATWAVGPHS 294

Query: 318 LSASWQQVNGNEYFDYLHETNG---------IFLANSLLSDFNGPNEKSLQLSYVLNMAP 368
            + + Q+  G+  + Y    N          I LANS  SDFNG +E+S QL Y ++ A 
Sbjct: 295 FTVAHQRSTGDTGYLYGGYRNAGGIGDGGNTILLANSYWSDFNGKDERSWQLGYGIDFAT 354

Query: 369 YGVPGLKFNLYNARGWGIDGTHYRGTAYDVNGLDGETHYEWGIGTSYALQSGPLKDTSIR 428
           +GVPGL +N+   RG  ID    RG        DG     W     Y +QSGP KD S+R
Sbjct: 355 FGVPGLTYNVAYVRGTNIDDGTNRG--------DGTEREIWN-QFKYVVQSGPAKDLSLR 405

Query: 429 ATYTTHRASKAQGDGSL--DEFRVVTTIPFNI 458
           A  +  R S      ++  +E R+    P N+
Sbjct: 406 ARASWLRVSNNADQYNVGGNEIRLFADYPINV 437